Factsheet for HORVU6Hr1G050700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59959	Canola	mitochondrion	40.0	19.72
HORVU7Hr1G022550.1	Barley	cytosol	88.57	11.79
TraesCS7D01G101600.1	Wheat	cytosol	85.71	11.45
TraesCS7B01G005800.1	Wheat	cytosol	85.71	11.45
TraesCS7A01G107200.1	Wheat	cytosol	85.71	11.45
Zm00001d040515_P001	Maize	mitochondrion	77.14	10.31
Os01t0283100-01	Rice	mitochondrion	77.14	10.27
EES00597	Sorghum	mitochondrion	77.14	10.27
Bra012077.1-P	Field mustard	mitochondrion	71.43	9.88
CDY45234	Canola	mitochondrion	71.43	9.88
Zm00001d008215_P002	Maize	mitochondrion	77.14	9.82
PGSC0003DMT400009047	Potato	mitochondrion	74.29	9.63
Solyc02g085040.2.1	Tomato	extracellular	74.29	9.63
CDY30772	Canola	mitochondrion	68.57	9.34
Solyc02g062600.2.1	Tomato	extracellular, nucleus	71.43	9.33
PGSC0003DMT400040041	Potato	cytosol, mitochondrion	71.43	9.33
CDY55089	Canola	mitochondrion	68.57	9.3
AT5G66510.2	Thale cress	mitochondrion	71.43	9.29
CDY50984	Canola	mitochondrion	68.57	9.23
VIT_18s0001g12730.t01	Wine grape	cytosol	71.43	9.19
KRH28712	Soybean	mitochondrion	68.57	8.89
HORVU3Hr1G045680.1	Barley	cytosol, plastid	80.0	8.62
CDX96658	Canola	mitochondrion	65.71	8.55
Bra016502.1-P	Field mustard	mitochondrion	65.71	8.55
CDX83758	Canola	mitochondrion, plastid	65.71	8.55
KRH76755	Soybean	mitochondrion	65.71	8.52
AT1G19580.1	Thale cress	mitochondrion	65.71	8.36
KRH61146	Soybean	cytosol	60.0	7.61
KRH51833	Soybean	mitochondrion	51.43	6.59
PGSC0003DMT400009474	Potato	mitochondrion	45.71	5.86
Solyc04g080570.2.1	Tomato	plastid	45.71	5.86
CDY39368	Canola	mitochondrion	14.29	2.06
HORVU2Hr1G025530.2	Barley	plastid	17.14	1.96
Bra025750.1-P	Field mustard	cytosol	5.71	1.12
CDY29419	Canola	cytosol	5.71	1.09
HORVU6Hr1G044700.2	Barley	mitochondrion	2.86	0.39
KRH61144	Soybean	cytosol	0.0	0.0
VIT_04s0023g02060.t01	Wine grape	cytosol	0.0	0.0
HORVU3Hr1G045750.1	Barley	cytosol	0.0	0.0
HORVU3Hr1G045700.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G050700.1	EnsemblPlantsGene:HORVU6Hr1G050700	PANTHER:PTHR13061	PANTHER:PTHR13061:SF9	UniParc:UPI000B47ECC0	UniProt:A0A287U536
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:307627360..307627587

Molecular Weight (calculated)

3979.8 Da

IEP (calculated)

10.021

GRAVY (calculated)

-0.183

Length

35 amino acids

Sequence
(BLAST)

1: MAKASYAVGF WIRETGRALD RLGCRLQGNY FFPSP

Best Arabidopsis Sequence Match ( AT1G19580.2 )
(BLAST)

001: MGTLGRAFYS VGFWIRETGQ ALDRLGCRLQ GKNYFREQLS RHRTLMNVFD KAPIVDKEAF VAPSASVIGD VHIGRGSSIW YGCVLRGDVN TVSVGSGTNI
101: QDNSLVHVAK SNLSGKVHPT IIGDNVTIGH SAVLHGCTVE DETFIGMGAT LLDGVVVEKH GMVAAGALVR QNTRIPSGEF LVLRILLLYL DRTYLIHFSD
201: ALTDYKCMGR KPSKVPQEAH

Arabidopsis Description

GAMMACA1GAMMA CA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHZ1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.