CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55089	Canola	mitochondrion	93.46	94.19
CDY30772	Canola	mitochondrion	85.0	85.99
CDY45234	Canola	mitochondrion	83.46	85.77
AT5G66510.2	Thale cress	mitochondrion	81.54	78.81
CDX83758	Canola	mitochondrion, plastid	72.31	69.89
CDX96658	Canola	mitochondrion	72.31	69.89
HORVU6Hr1G050700.1	Barley	cytosol, mitochondrion	9.23	68.57
KRH76755	Soybean	mitochondrion	70.0	67.41
KRH28712	Soybean	mitochondrion	69.62	67.04
TraesCS7D01G101600.1	Wheat	cytosol	66.15	65.65
TraesCS7A01G107200.1	Wheat	cytosol	66.15	65.65
TraesCS3D01G199500.1	Wheat	cytosol	66.15	65.65
TraesCS3A01G193500.1	Wheat	cytosol	65.77	65.27
TraesCS3B01G224000.1	Wheat	mitochondrion	65.77	65.27
TraesCS7B01G005800.1	Wheat	cytosol	65.77	65.27
HORVU7Hr1G022550.1	Barley	cytosol	65.38	64.64
EES00597	Sorghum	mitochondrion	65.38	64.64
Zm00001d040515_P001	Maize	mitochondrion	65.0	64.5
Os01t0283100-01	Rice	mitochondrion	64.62	63.88
Zm00001d008215_P002	Maize	mitochondrion	65.77	62.18
Os12t0169700-01	Rice	mitochondrion	63.85	60.81
CDY67628	Canola	mitochondrion	64.23	60.51
CDY17034	Canola	mitochondrion	64.23	60.51
CDY47592	Canola	mitochondrion	64.23	60.51
TraesCS2D01G148200.1	Wheat	mitochondrion	62.69	59.49
TraesCS2A01G144200.1	Wheat	mitochondrion	62.69	59.49
EER99796	Sorghum	mitochondrion	62.31	59.34
VIT_04s0023g02060.t01	Wine grape	cytosol	51.92	59.21
CDY23649	Canola	mitochondrion	63.08	59.21
Zm00001d022324_P001	Maize	mitochondrion	61.54	58.61
Os07t0642900-01	Rice	nucleus	61.15	58.24
TraesCS2B01G169200.1	Wheat	golgi	61.15	58.03
HORVU3Hr1G045750.1	Barley	cytosol	38.08	56.9
HORVU3Hr1G045700.1	Barley	cytosol	38.08	56.9
HORVU3Hr1G045680.1	Barley	cytosol, plastid	63.85	51.08
CDY59959	Canola	mitochondrion	13.85	50.7
CDY29419	Canola	cytosol	35.77	50.54
HORVU2Hr1G025530.2	Barley	plastid	56.54	48.04
CDY39368	Canola	mitochondrion	37.31	39.92
CDY05862	Canola	mitochondrion	23.46	24.11
CDY08089	Canola	mitochondrion	23.46	23.83
CDY31369	Canola	mitochondrion	23.08	23.81
CDY16720	Canola	mitochondrion	22.69	23.41
CDY68990	Canola	mitochondrion	22.69	23.41
CDX84424	Canola	mitochondrion	22.69	23.41
CDY39864	Canola	mitochondrion	22.69	23.23
CDY66238	Canola	mitochondrion	23.08	21.74

Protein Annotations

EnsemblPlants:CDY50984	EnsemblPlantsGene:GSBRNA2T00097865001	Gene3D:2.160.10.10	InterPro:Hexapep	InterPro:Trimer_LpxA-like_sf	PANTHER:PTHR13061
PANTHER:PTHR13061:SF9	PFAM:PF00132	ProteinID:CDY50984	ProteinID:CDY50984.1	SUPFAM:SSF51161	UniParc:UPI0004EAE048
UniProt:A0A078INI1	MapMan:2.4.1.4.6	:	:	:	:

Description

BnaC02g48920DBnaC02g48920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078INI1]

Coordinates

chrLK032954:+:94902..96511

Molecular Weight (calculated)

28286.5 Da

IEP (calculated)

7.017

GRAVY (calculated)

-0.292

Length

260 amino acids

Sequence
(BLAST)

001: MASMGRALYS VGFWIRETGQ ALDRLGCRLQ GKNHFREQLS RHRTLMNVFD KAPIVDKEAL VAPSASIIGN VHLGPGSSIW YGCVLRGDAN TITVGAGTNI
101: QDNSLVHVAK SNLNGKVLPT LIGDNVTIGN SAVLHGCTLE DESYIGASAT VLDGAHVEKH AIVESGSLVR QNTRIPSGEV WGGNPARFLR KVTEEERAFF
201: STSAMDYSNL AQVHAAQNTK NLDETDFKKL LYKKNARDAE YDSLLNDDLT LSENHLPKAP

Best Arabidopsis Sequence Match ( AT5G66510.1 )
(BLAST)

001: MGTMGKAFYS VGFWIRETGQ ALDRLGCRLQ GKNHFREQLS RHRTLMNVFD KTPNVDKGAF VAPNASLSGD VHVGRGSSIW YGCVLRGDAN SISVGAGTNI
101: QDNALVHVAK TNLSGKVLPT VIGDNVTIGH SAVLHGCTVE DEAYIGTSAT VLDGAHVEKH AMVASGALVR QNTRIPSGEV WGGNPAKFLR KVTEEERVFF
201: SSSAVEYSNL AQAHATENAK NLDEAEFKKL LNKKNARDTE YDSVLDDLTL PENVPKAA

Arabidopsis Description

GAMMA CA3gamma carbonic anhydrase 3 [Source:TAIR;Acc:AT5G66510]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.