Factsheet for TraesCS2A01G144200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G148200.1	Wheat	mitochondrion	99.64	99.64
TraesCS2B01G169200.1	Wheat	golgi	96.35	96.35
Zm00001d022324_P001	Maize	mitochondrion	90.15	90.48
Os12t0169700-01	Rice	mitochondrion	89.78	90.11
EER99796	Sorghum	mitochondrion	88.69	89.01
Os07t0642900-01	Rice	nucleus	86.13	86.45
KRH61146	Soybean	cytosol	80.29	79.71
HORVU2Hr1G025530.2	Barley	plastid	88.69	79.41
KRH51833	Soybean	mitochondrion	78.1	78.39
PGSC0003DMT400009474	Potato	mitochondrion	75.91	76.19
GSMUA_Achr5P07890_001	Banana	mitochondrion	36.13	76.15
Solyc04g080570.2.1	Tomato	plastid	75.18	75.46
Solyc02g062600.2.1	Tomato	extracellular, nucleus	73.72	75.37
PGSC0003DMT400040041	Potato	cytosol, mitochondrion	73.72	75.37
VIT_18s0001g12730.t01	Wine grape	cytosol	74.82	75.37
KRH61144	Soybean	cytosol	59.85	75.23
GSMUA_Achr5P07880_001	Banana	cytosol, mitochondrion, plastid	30.29	74.77
AT1G19580.1	Thale cress	mitochondrion	71.17	70.91
PGSC0003DMT400009047	Potato	mitochondrion	68.98	70.0
Solyc02g085040.2.1	Tomato	extracellular	68.98	70.0
GSMUA_AchrUn_...	Banana	extracellular, golgi	41.97	69.7
Bra016502.1-P	Field mustard	mitochondrion	68.25	69.52
CDX96658	Canola	mitochondrion	68.25	69.52
CDX83758	Canola	mitochondrion, plastid	68.25	69.52
TraesCS3A01G193500.1	Wheat	cytosol	66.06	69.08
KRH76755	Soybean	mitochondrion	67.52	68.52
VIT_04s0023g02060.t01	Wine grape	cytosol	56.57	67.98
KRH28712	Soybean	mitochondrion	66.79	67.78
TraesCS7A01G107200.1	Wheat	cytosol	64.6	67.56
CDY50984	Canola	mitochondrion	59.49	62.69
AT5G66510.2	Thale cress	mitochondrion	61.31	62.45
CDY55089	Canola	mitochondrion	58.03	61.63
GSMUA_Achr2P01940_001	Banana	cytosol	54.38	61.32
Bra012077.1-P	Field mustard	mitochondrion	56.57	61.26
CDY59959	Canola	mitochondrion	15.69	60.56
CDY45234	Canola	mitochondrion	55.84	60.47
CDY30772	Canola	mitochondrion	56.57	60.31
CDY29419	Canola	cytosol	33.21	49.46
Bra025750.1-P	Field mustard	cytosol	31.75	48.88
CDY39368	Canola	mitochondrion	34.31	38.68
TraesCS6A01G188800.2	Wheat	golgi	19.34	20.7

Protein Annotations

EnsemblPlants:TraesCS2A01G144200.1	EnsemblPlantsGene:TraesCS2A01G144200	Gene3D:2.160.10.10	InterPro:Hexapep	InterPro:Trimer_LpxA-like_sf	PANTHER:PTHR13061
PANTHER:PTHR13061:SF23	PFAM:PF00132	SUPFAM:SSF51161	TIGR:cd04645	MapMan:2.4.1.4.6	:

Description

No Description!

Coordinates

chr2A:+:89118331..89120946

Molecular Weight (calculated)

29597.6 Da

IEP (calculated)

7.394

GRAVY (calculated)

-0.114

Length

274 amino acids

Sequence
(BLAST)

001: MGTLGRAIYT VGKWIRGTGQ AMDRLGSTIQ GGLRAEEQVS RHRTVMSIFD KEPRINKDVF VAPSASVIGD VEIGHGSSIW YGSVLRGDVN SIRIGSGSNI
101: QDNSLVHVAK TNISGKVLPT IIGSNVTVGH SAVLHACTIE DEAFVGMGAT LLDGVVVEKH SMVGAGSLVK QNTRIPSGEV WVGNPAKFLR KLTEEEITFI
201: AQSAANYINL AHVHATENSK SFDEIELEKK LRKKFAHKDE EYDSMLGVVR EIPPQLILPD NILPDKAPKA AVAH

Best Arabidopsis Sequence Match ( AT1G47260.1 )
(BLAST)

001: MGTLGRAIYT VGNWIRGTGQ ALDRVGSLLQ GSHRIEEHLS RHRTLMNVFD KSPLVDKDVF VAPSASVIGD VQIGKGSSIW YGCVLRGDVN NISVGSGTNI
101: QDNTLVHVAK TNISGKVLPT LIGDNVTVGH SAVIHGCTVE DDAFVGMGAT LLDGVVVEKH AMVAAGSLVK QNTRIPSGEV WGGNPAKFMR KLTDEEIVYI
201: SQSAKNYINL AQIHASENSK SFEQIEVERA LRKKYARKDE DYDSMLGITR ETPPELILPD NVLPGGKPVA KVPSTQYF

Arabidopsis Description

GAMMACA2GAMMA CA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WI45]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.