Factsheet for Bra012077.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45234	Canola	mitochondrion	95.65	95.65
AT5G66510.2	Thale cress	mitochondrion	86.17	81.04
HORVU6Hr1G050700.1	Barley	cytosol, mitochondrion	9.88	71.43
PGSC0003DMT400040041	Potato	cytosol, mitochondrion	72.73	68.66
KRH76755	Soybean	mitochondrion	73.12	68.52
KRH28712	Soybean	mitochondrion	73.12	68.52
Solyc02g062600.2.1	Tomato	extracellular, nucleus	72.33	68.28
Bra016502.1-P	Field mustard	mitochondrion	71.94	67.66
Solyc02g085040.2.1	Tomato	extracellular	71.54	67.04
PGSC0003DMT400009047	Potato	mitochondrion	71.54	67.04
TraesCS3D01G199500.1	Wheat	cytosol	69.17	66.79
TraesCS3A01G193500.1	Wheat	cytosol	68.77	66.41
TraesCS3B01G224000.1	Wheat	mitochondrion	68.77	66.41
TraesCS7A01G107200.1	Wheat	cytosol	68.77	66.41
TraesCS7D01G101600.1	Wheat	cytosol	68.77	66.41
TraesCS7B01G005800.1	Wheat	cytosol	68.38	66.03
HORVU7Hr1G022550.1	Barley	cytosol	68.38	65.78
EES00597	Sorghum	mitochondrion	67.59	65.02
Zm00001d040515_P001	Maize	mitochondrion	67.19	64.89
Os01t0283100-01	Rice	mitochondrion	66.8	64.26
Zm00001d008215_P002	Maize	mitochondrion	67.19	61.82
VIT_04s0023g02060.t01	Wine grape	cytosol	54.55	60.53
Os12t0169700-01	Rice	mitochondrion	63.24	58.61
Bra032216.1-P	Field mustard	mitochondrion	63.24	57.97
HORVU3Hr1G045700.1	Barley	cytosol	39.53	57.47
HORVU3Hr1G045750.1	Barley	cytosol	39.53	57.47
EER99796	Sorghum	mitochondrion	61.66	57.14
TraesCS2A01G144200.1	Wheat	mitochondrion	61.26	56.57
TraesCS2D01G148200.1	Wheat	mitochondrion	61.26	56.57
Zm00001d022324_P001	Maize	mitochondrion	60.87	56.41
Os07t0642900-01	Rice	nucleus	60.47	56.04
TraesCS2B01G169200.1	Wheat	golgi	60.47	55.84
Bra014069.1-P	Field mustard	mitochondrion	49.8	52.94
HORVU3Hr1G045680.1	Barley	cytosol, plastid	66.4	51.69
Bra025750.1-P	Field mustard	cytosol	33.2	47.19
HORVU2Hr1G025530.2	Barley	plastid	56.13	46.41
Bra038640.1-P	Field mustard	mitochondrion	22.53	22.62
Bra018042.1-P	Field mustard	mitochondrion	22.53	22.27
Bra029221.1-P	Field mustard	mitochondrion	22.13	22.22
Bra035840.1-P	Field mustard	mitochondrion	21.74	21.07

Protein Annotations

EnsemblPlants:Bra012077.1	EnsemblPlants:Bra012077.1-P	EnsemblPlantsGene:Bra012077	Gene3D:2.160.10.10	InterPro:Hexapep	InterPro:Trimer_LpxA-like_sf
PANTHER:PTHR13061	PANTHER:PTHR13061:SF9	PFAM:PF00132	SUPFAM:SSF51161	UniParc:UPI00025417E1	UniProt:M4D6G8
MapMan:2.4.1.4.6	:	:	:	:	:

Description

AT5G66510 (E=5e-125) GAMMA CA3 | GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3); carbonate dehydratase

Coordinates

chrA07:+:10166187..10167519

Molecular Weight (calculated)

27408.4 Da

IEP (calculated)

7.253

GRAVY (calculated)

-0.268

Length

253 amino acids

Sequence
(BLAST)

001: MVMGKALYSV GFWIRETGQA LDRLGCRLQG KNHFREQLSR HRTLMNVFDK APSVDKQAFV APSASLIGNV HVGPASSIWY GCVLRGDANS ISVGAGTNIQ
101: DNTLVHVAKS NLSGKVLPTL IGDNVTIGHS AVLHGCTVED EAYIGASATV LDGAHVEKQA MVESGALVRQ NTRIPSGEVW GGNPARFMRK VTEEEKAFFS
201: SSAVDYSNLA QVHTAENTKN LDETDFKKLL YKKNARDAEY DDLSLSENVP KSA

Best Arabidopsis Sequence Match ( AT5G66510.1 )
(BLAST)

001: MGTMGKAFYS VGFWIRETGQ ALDRLGCRLQ GKNHFREQLS RHRTLMNVFD KTPNVDKGAF VAPNASLSGD VHVGRGSSIW YGCVLRGDAN SISVGAGTNI
101: QDNALVHVAK TNLSGKVLPT VIGDNVTIGH SAVLHGCTVE DEAYIGTSAT VLDGAHVEKH AMVASGALVR QNTRIPSGEV WGGNPAKFLR KVTEEERVFF
201: SSSAVEYSNL AQAHATENAK NLDEAEFKKL LNKKNARDTE YDSVLDDLTL PENVPKAA

Arabidopsis Description

GAMMA CA3gamma carbonic anhydrase 3 [Source:TAIR;Acc:AT5G66510]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.