CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012077.1-P	Field mustard	mitochondrion	95.65	95.65
CDY30772	Canola	mitochondrion	91.3	89.88
CDY50984	Canola	mitochondrion	85.77	83.46
CDY55089	Canola	mitochondrion	84.19	82.56
AT5G66510.2	Thale cress	mitochondrion	83.79	78.81
HORVU6Hr1G050700.1	Barley	cytosol, mitochondrion	9.88	71.43
KRH76755	Soybean	mitochondrion	73.91	69.26
CDX96658	Canola	mitochondrion	72.33	68.03
KRH28712	Soybean	mitochondrion	72.33	67.78
CDX83758	Canola	mitochondrion, plastid	71.94	67.66
TraesCS7D01G101600.1	Wheat	cytosol	69.57	67.18
TraesCS7A01G107200.1	Wheat	cytosol	69.57	67.18
TraesCS3D01G199500.1	Wheat	cytosol	69.57	67.18
TraesCS3B01G224000.1	Wheat	mitochondrion	69.17	66.79
TraesCS3A01G193500.1	Wheat	cytosol	69.17	66.79
TraesCS7B01G005800.1	Wheat	cytosol	68.77	66.41
HORVU7Hr1G022550.1	Barley	cytosol	68.77	66.16
EES00597	Sorghum	mitochondrion	68.77	66.16
Zm00001d040515_P001	Maize	mitochondrion	68.38	66.03
Os01t0283100-01	Rice	mitochondrion	67.59	65.02
Zm00001d008215_P002	Maize	mitochondrion	68.38	62.91
VIT_04s0023g02060.t01	Wine grape	cytosol	54.55	60.53
HORVU3Hr1G045700.1	Barley	cytosol	40.71	59.2
HORVU3Hr1G045750.1	Barley	cytosol	40.71	59.2
CDY47592	Canola	mitochondrion	63.64	58.33
Os12t0169700-01	Rice	mitochondrion	62.85	58.24
CDY67628	Canola	mitochondrion	63.24	57.97
CDY17034	Canola	mitochondrion	63.24	57.97
EER99796	Sorghum	mitochondrion	61.26	56.78
CDY23649	Canola	mitochondrion	62.06	56.68
Os07t0642900-01	Rice	nucleus	60.87	56.41
TraesCS2A01G144200.1	Wheat	mitochondrion	60.47	55.84
TraesCS2D01G148200.1	Wheat	mitochondrion	60.47	55.84
Zm00001d022324_P001	Maize	mitochondrion	60.08	55.68
TraesCS2B01G169200.1	Wheat	golgi	60.08	55.47
HORVU3Hr1G045680.1	Barley	cytosol, plastid	67.19	52.31
CDY29419	Canola	cytosol	35.18	48.37
CDY59959	Canola	mitochondrion	13.44	47.89
HORVU2Hr1G025530.2	Barley	plastid	55.73	46.08
CDY39368	Canola	mitochondrion	35.57	37.04
CDY05862	Canola	mitochondrion	22.13	22.13
CDY08089	Canola	mitochondrion	22.13	21.88
CDY68990	Canola	mitochondrion	21.74	21.83
CDY31369	Canola	mitochondrion	21.74	21.83
CDY16720	Canola	mitochondrion	21.34	21.43
CDX84424	Canola	mitochondrion	21.34	21.43
CDY39864	Canola	mitochondrion	21.34	21.26
CDY66238	Canola	mitochondrion	21.74	19.93

Protein Annotations

EnsemblPlants:CDY45234	EnsemblPlantsGene:GSBRNA2T00081669001	Gene3D:2.160.10.10	InterPro:Hexapep	InterPro:Trimer_LpxA-like_sf	PANTHER:PTHR13061
PANTHER:PTHR13061:SF9	PFAM:PF00132	ProteinID:CDY45234	ProteinID:CDY45234.1	SUPFAM:SSF51161	UniParc:UPI0004EE066C
UniProt:A0A078I745	MapMan:2.4.1.4.6	:	:	:	:

Description

BnaA07g12560DBnaA07g12560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I745]

Coordinates

chrLK032618:-:139858..141551

Molecular Weight (calculated)

27362.3 Da

IEP (calculated)

7.253

GRAVY (calculated)

-0.258

Length

253 amino acids

Sequence
(BLAST)

001: MVMGKALYSV GFWIRETGQA LDRLGCRLQG KNHFREQLSR HRTLMNVFDK APSVDKQAFV APSASLIGNV HVGPASSIWY GCVLRGDANS ISVGAGTNIQ
101: DNTLVHVAKS NLSGKVLPTL IGDNVTIGHS AVLHGCTVED EAYIGASATV LDGAHVEKQA MVESGALVRQ NTKIPSGEVW GGNPARFLRK VTEEEKAFFS
201: SSAVDYSNLA QVHTAENTKN LDETDFKKLL YKKNARDAEY DDLSLSENVP KSA

Best Arabidopsis Sequence Match ( AT5G66510.1 )
(BLAST)

001: MGTMGKAFYS VGFWIRETGQ ALDRLGCRLQ GKNHFREQLS RHRTLMNVFD KTPNVDKGAF VAPNASLSGD VHVGRGSSIW YGCVLRGDAN SISVGAGTNI
101: QDNALVHVAK TNLSGKVLPT VIGDNVTIGH SAVLHGCTVE DEAYIGTSAT VLDGAHVEKH AMVASGALVR QNTRIPSGEV WGGNPAKFLR KVTEEERVFF
201: SSSAVEYSNL AQAHATENAK NLDEAEFKKL LNKKNARDTE YDSVLDDLTL PENVPKAA

Arabidopsis Description

GAMMA CA3gamma carbonic anhydrase 3 [Source:TAIR;Acc:AT5G66510]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.