Factsheet for Zm00001d022324_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

extracellular: 20408568
plastid: 23198870
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99796	Sorghum	mitochondrion	97.8	97.8
Os12t0169700-01	Rice	mitochondrion	94.51	94.51
Os07t0642900-01	Rice	nucleus	92.31	92.31
TraesCS2D01G148200.1	Wheat	mitochondrion	90.48	90.15
TraesCS2A01G144200.1	Wheat	mitochondrion	90.48	90.15
TraesCS2B01G169200.1	Wheat	golgi	90.11	89.78
KRH61146	Soybean	cytosol	78.75	77.9
KRH51833	Soybean	mitochondrion	77.66	77.66
PGSC0003DMT400009474	Potato	mitochondrion	75.82	75.82
GSMUA_Achr5P07880_001	Banana	cytosol, mitochondrion, plastid	30.77	75.68
Solyc04g080570.2.1	Tomato	plastid	75.46	75.46
VIT_18s0001g12730.t01	Wine grape	cytosol	75.09	75.37
GSMUA_Achr5P07890_001	Banana	mitochondrion	35.53	74.62
HORVU2Hr1G025530.2	Barley	plastid	82.78	73.86
Solyc02g062600.2.1	Tomato	extracellular, nucleus	72.16	73.51
PGSC0003DMT400040041	Potato	cytosol, mitochondrion	72.16	73.51
KRH61144	Soybean	cytosol	58.24	72.94
AT1G19580.1	Thale cress	mitochondrion	71.79	71.27
Solyc02g085040.2.1	Tomato	extracellular	68.5	69.26
PGSC0003DMT400009047	Potato	mitochondrion	68.5	69.26
GSMUA_AchrUn_...	Banana	extracellular, golgi	41.76	69.09
CDX83758	Canola	mitochondrion, plastid	67.77	68.77
CDX96658	Canola	mitochondrion	67.77	68.77
Bra016502.1-P	Field mustard	mitochondrion	67.77	68.77
Zm00001d040515_P001	Maize	mitochondrion	65.57	68.32
KRH76755	Soybean	mitochondrion	67.4	68.15
KRH28712	Soybean	mitochondrion	66.67	67.41
VIT_04s0023g02060.t01	Wine grape	cytosol	56.04	67.11
Zm00001d008215_P002	Maize	mitochondrion	67.4	66.91
CDY50984	Canola	mitochondrion	58.61	61.54
AT5G66510.2	Thale cress	mitochondrion	60.07	60.97
GSMUA_Achr2P01940_001	Banana	cytosol	54.21	60.91
Bra012077.1-P	Field mustard	mitochondrion	56.41	60.87
CDY55089	Canola	mitochondrion	57.14	60.47
CDY45234	Canola	mitochondrion	55.68	60.08
CDY30772	Canola	mitochondrion	56.04	59.53
CDY59959	Canola	mitochondrion	14.29	54.93
CDY29419	Canola	cytosol	33.7	50.0
Bra025750.1-P	Field mustard	cytosol	32.23	49.44
CDY39368	Canola	mitochondrion	34.8	39.09
Zm00001d016566_P001	Maize	mitochondrion	18.32	16.89

Protein Annotations

EntrezGene:100382844	Gene3D:2.160.10.10	MapMan:2.4.1.4.6	EMBL:BT065529	UniProt:C0PB60	GO:GO:0000003
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005747	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009651	GO:GO:0009791
GO:GO:0009901	GO:GO:0009908	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0031966
GO:GO:0042802	GO:GO:0045271	GO:GO:0070207	GO:GO:2000377	InterPro:Hexapep	ProteinID:ONM60124.1
PFAM:PF00132	PANTHER:PTHR13061	PANTHER:PTHR13061:SF23	SUPFAM:SSF51161	InterPro:Trimer_LpxA-like_sf	UniParc:UPI00018C850D
EnsemblPlantsGene:Zm00001d022324	EnsemblPlants:Zm00001d022324_P001	EnsemblPlants:Zm00001d022324_T001	:	:	:

Description

Gamma carbonic anhydrase 2 mitochondrial

Coordinates

chr7:-:175460208..175464217

Molecular Weight (calculated)

29645.7 Da

IEP (calculated)

7.138

GRAVY (calculated)

-0.077

Length

273 amino acids

Sequence
(BLAST)

001: MGTLGRAIFT VGKWIRGTGQ AMDRLGSTIQ GGLRVEEQVS RHRTIMNIFE KEPRIHRDVF VAPSAAVIGD VEIGHGSSIW YGSILRGDVN SIHIGSGTNI
101: QDNSLVHVSK ANISGKVLPT IIGSNVTVGH SAVLHACTIE DEAFVGMGAT LLDGVVVEKH SMVGAGSLVK QNTRIPSGEV WVGNPAKFLR KLTEEEIAFI
201: AQSATNYINL AQVHAAENAK SFDEIELEKM LRKKYAHKDE EYDSMLGVVR EIPPQLILPD NILPHNAQKA VAR

Best Arabidopsis Sequence Match ( AT1G47260.1 )
(BLAST)

001: MGTLGRAIYT VGNWIRGTGQ ALDRVGSLLQ GSHRIEEHLS RHRTLMNVFD KSPLVDKDVF VAPSASVIGD VQIGKGSSIW YGCVLRGDVN NISVGSGTNI
101: QDNTLVHVAK TNISGKVLPT LIGDNVTVGH SAVIHGCTVE DDAFVGMGAT LLDGVVVEKH AMVAAGSLVK QNTRIPSGEV WGGNPAKFMR KLTDEEIVYI
201: SQSAKNYINL AQIHASENSK SFEQIEVERA LRKKYARKDE DYDSMLGITR ETPPELILPD NVLPGGKPVA KVPSTQYF

Arabidopsis Description

GAMMACA2GAMMA CA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WI45]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.