Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P09250_001 | Banana | cytosol | 51.83 | 73.86 |
| KRH51833 | Soybean | mitochondrion | 87.61 | 69.96 |
| KRH61146 | Soybean | cytosol | 86.7 | 68.48 |
| VIT_18s0001g12730.t01 | Wine grape | cytosol | 83.49 | 66.91 |
| HORVU3Hr1G045700.1 | Barley | cytosol | 52.75 | 66.09 |
| HORVU3Hr1G045750.1 | Barley | cytosol | 52.75 | 66.09 |
| Solyc04g080570.2.1 | Tomato | plastid | 78.44 | 62.64 |
| PGSC0003DMT400009474 | Potato | mitochondrion | 77.98 | 62.27 |
| TraesCS2B01G169200.1 | Wheat | golgi | 76.61 | 60.95 |
| KRH76755 | Soybean | mitochondrion | 75.23 | 60.74 |
| AT1G19580.1 | Thale cress | mitochondrion | 76.15 | 60.36 |
| TraesCS2A01G144200.1 | Wheat | mitochondrion | 75.23 | 59.85 |
| TraesCS2D01G148200.1 | Wheat | mitochondrion | 75.23 | 59.85 |
| KRH28712 | Soybean | mitochondrion | 73.85 | 59.63 |
| TraesCS3D01G199500.1 | Wheat | cytosol | 71.56 | 59.54 |
| Os12t0169700-01 | Rice | mitochondrion | 73.85 | 58.97 |
| EES00597 | Sorghum | mitochondrion | 71.1 | 58.94 |
| TraesCS3A01G193500.1 | Wheat | cytosol | 70.64 | 58.78 |
| TraesCS3B01G224000.1 | Wheat | mitochondrion | 70.64 | 58.78 |
| TraesCS7A01G107200.1 | Wheat | cytosol | 70.64 | 58.78 |
| EER99796 | Sorghum | mitochondrion | 73.39 | 58.61 |
| HORVU7Hr1G022550.1 | Barley | cytosol | 70.64 | 58.56 |
| TraesCS7D01G101600.1 | Wheat | cytosol | 70.18 | 58.4 |
| Zm00001d022324_P001 | Maize | mitochondrion | 72.94 | 58.24 |
| TraesCS7B01G005800.1 | Wheat | cytosol | 69.72 | 58.02 |
| Zm00001d040515_P001 | Maize | mitochondrion | 69.72 | 58.02 |
| Bra016502.1-P | Field mustard | mitochondrion | 71.1 | 57.62 |
| CDX96658 | Canola | mitochondrion | 71.1 | 57.62 |
| CDX83758 | Canola | mitochondrion, plastid | 71.1 | 57.62 |
| Os07t0642900-01 | Rice | nucleus | 71.1 | 56.78 |
| Os01t0283100-01 | Rice | mitochondrion | 67.89 | 56.27 |
| Zm00001d008215_P002 | Maize | mitochondrion | 69.27 | 54.91 |
| HORVU2Hr1G025530.2 | Barley | plastid | 76.15 | 54.25 |
| CDY29419 | Canola | cytosol | 43.58 | 51.63 |
| Bra025750.1-P | Field mustard | cytosol | 41.74 | 51.12 |
| GSMUA_Achr3P09240_001 | Banana | mitochondrion | 29.36 | 49.23 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 28.44 | 47.69 |
| HORVU3Hr1G045680.1 | Barley | cytosol, plastid | 67.43 | 45.23 |
| CDY39368 | Canola | mitochondrion | 39.91 | 35.8 |
| KRH41125 | Soybean | endoplasmic reticulum, mitochondrion | 19.27 | 16.6 |
| KRH59820 | Soybean | mitochondrion | 18.81 | 16.21 |
| HORVU6Hr1G050700.1 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02002158 | EnsemblPlants:KRH61144 | EnsemblPlantsGene:GLYMA_04G030700 | Gene3D:2.160.10.10 | InterPro:Trimer_LpxA-like_sf | PANTHER:PTHR13061 |
| PANTHER:PTHR13061:SF9 | ProteinID:KRH61144 | ProteinID:KRH61144.1 | SUPFAM:SSF51161 | UniParc:UPI0006EDE613 | UniProt:A0A0R0K7W7 |
| MapMan:2.4.1.4.6 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:2493579..2495558
Molecular Weight (calculated)
23683.6 Da
IEP (calculated)
6.026
GRAVY (calculated)
0.050
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: SRHLTLMNIF DKAPVVDKDA FVAPSASVVW YGCVLRGDVS SIRIGSGTNI QDNSLVHVAK SNLSGKVLPT MIGDIMLLSV SHSAVLHGCT VEDEAFVGMG
101: AILLLDGVIV EKNAMVAVGA LVRQNTRIPS GEVWAGNPAK FLRKLTDEEI AFISQSAANY TNLAQVHAAE NSKSFDEIEF EKVLLRKKFA RKDEEYDSML
201: DVVPDNVLPD KAEKALKK
101: AILLLDGVIV EKNAMVAVGA LVRQNTRIPS GEVWAGNPAK FLRKLTDEEI AFISQSAANY TNLAQVHAAE NSKSFDEIEF EKVLLRKKFA RKDEEYDSML
201: DVVPDNVLPD KAEKALKK
001: MGTLGRAFYS VGFWIRETGQ ALDRLGCRLQ GKNYFREQLS RHRTLMNVFD KAPIVDKEAF VAPSASVIGD VHIGRGSSIW YGCVLRGDVN TVSVGSGTNI
101: QDNSLVHVAK SNLSGKVHPT IIGDNVTIGH SAVLHGCTVE DETFIGMGAT LLDGVVVEKH GMVAAGALVR QNTRIPSGEV WGGNPARFLR KLTDEEIAFI
201: SQSATNYSNL AQAHAAENAK PLNVIEFEKV LRKKHALKDE EYDSMLGIVR ETPPELNLPN NILPDKETKR PSNVN
101: QDNSLVHVAK SNLSGKVHPT IIGDNVTIGH SAVLHGCTVE DETFIGMGAT LLDGVVVEKH GMVAAGALVR QNTRIPSGEV WGGNPARFLR KLTDEEIAFI
201: SQSATNYSNL AQAHAAENAK PLNVIEFEKV LRKKHALKDE EYDSMLGIVR ETPPELNLPN NILPDKETKR PSNVN
Arabidopsis Description
GAMMACA1GAMMA CA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHZ1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.