Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 5
- plastid 1
- cytosol 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G19580.1 | CDY17034 | AT1G47260.1 | 15821992 |
| AT1G19580.1 | CDY23649 | AT1G47260.1 | 15821992 |
| AT1G19580.1 | CDY47592 | AT1G47260.1 | 15821992 |
| AT1G19580.1 | CDY67628 | AT1G47260.1 | 15821992 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29419 | Canola | cytosol | 55.14 | 72.83 |
| CDX96658 | Canola | mitochondrion | 52.67 | 47.58 |
| CDX83758 | Canola | mitochondrion, plastid | 52.26 | 47.21 |
| AT1G19580.1 | Thale cress | mitochondrion | 51.44 | 45.45 |
| VIT_18s0001g12730.t01 | Wine grape | cytosol | 45.68 | 40.81 |
| TraesCS7D01G101600.1 | Wheat | cytosol | 43.62 | 40.46 |
| HORVU3Hr1G045700.1 | Barley | cytosol | 28.81 | 40.23 |
| HORVU3Hr1G045750.1 | Barley | cytosol | 28.81 | 40.23 |
| TraesCS3B01G224000.1 | Wheat | mitochondrion | 43.21 | 40.08 |
| TraesCS7B01G005800.1 | Wheat | cytosol | 43.21 | 40.08 |
| HORVU7Hr1G022550.1 | Barley | cytosol | 43.21 | 39.92 |
| KRH61144 | Soybean | cytosol | 35.8 | 39.91 |
| TraesCS7A01G107200.1 | Wheat | cytosol | 42.8 | 39.69 |
| TraesCS3D01G199500.1 | Wheat | cytosol | 42.8 | 39.69 |
| TraesCS3A01G193500.1 | Wheat | cytosol | 42.8 | 39.69 |
| Os01t0283100-01 | Rice | mitochondrion | 42.8 | 39.54 |
| Solyc04g080570.2.1 | Tomato | plastid | 43.21 | 38.46 |
| GSMUA_Achr3P09240_001 | Banana | mitochondrion | 20.58 | 38.46 |
| EES00597 | Sorghum | mitochondrion | 41.56 | 38.4 |
| KRH61146 | Soybean | cytosol | 43.21 | 38.04 |
| CDY67628 | Canola | mitochondrion | 43.21 | 38.04 |
| CDY23649 | Canola | mitochondrion | 43.21 | 37.91 |
| PGSC0003DMT400009474 | Potato | mitochondrion | 42.39 | 37.73 |
| CDY47592 | Canola | mitochondrion | 42.8 | 37.68 |
| Zm00001d040515_P001 | Maize | mitochondrion | 40.33 | 37.4 |
| CDY17034 | Canola | mitochondrion | 42.39 | 37.32 |
| CDY50984 | Canola | mitochondrion | 39.92 | 37.31 |
| CDY55089 | Canola | mitochondrion | 39.51 | 37.21 |
| KRH51833 | Soybean | mitochondrion | 41.56 | 37.0 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 19.75 | 36.92 |
| Zm00001d008215_P002 | Maize | mitochondrion | 41.15 | 36.36 |
| GSMUA_Achr3P09250_001 | Banana | cytosol | 22.63 | 35.95 |
| CDY30772 | Canola | mitochondrion | 37.86 | 35.8 |
| CDY45234 | Canola | mitochondrion | 37.04 | 35.57 |
| EER99796 | Sorghum | mitochondrion | 39.51 | 35.16 |
| Os12t0169700-01 | Rice | mitochondrion | 39.51 | 35.16 |
| Os07t0642900-01 | Rice | nucleus | 39.09 | 34.8 |
| Zm00001d022324_P001 | Maize | mitochondrion | 39.09 | 34.8 |
| TraesCS2D01G148200.1 | Wheat | mitochondrion | 38.68 | 34.31 |
| TraesCS2A01G144200.1 | Wheat | mitochondrion | 38.68 | 34.31 |
| TraesCS2B01G169200.1 | Wheat | golgi | 38.68 | 34.31 |
| HORVU2Hr1G025530.2 | Barley | plastid | 39.92 | 31.7 |
| HORVU3Hr1G045680.1 | Barley | cytosol, plastid | 39.51 | 29.54 |
| CDY59959 | Canola | mitochondrion | 7.0 | 23.94 |
| HORVU6Hr1G050700.1 | Barley | cytosol, mitochondrion | 2.06 | 14.29 |
| CDY68990 | Canola | mitochondrion | 11.52 | 11.11 |
| CDY16720 | Canola | mitochondrion | 11.52 | 11.11 |
| CDY31369 | Canola | mitochondrion | 11.11 | 10.71 |
| CDX84424 | Canola | mitochondrion | 11.11 | 10.71 |
| CDY39864 | Canola | mitochondrion | 11.11 | 10.63 |
| CDY05862 | Canola | mitochondrion | 10.7 | 10.28 |
| CDY08089 | Canola | mitochondrion | 10.7 | 10.16 |
| CDY66238 | Canola | mitochondrion | 11.52 | 10.14 |
Protein Annotations
| EnsemblPlants:CDY39368 | EnsemblPlantsGene:GSBRNA2T00067817001 | PANTHER:PTHR13061 | PANTHER:PTHR13061:SF9 | ProteinID:CDY39368 | ProteinID:CDY39368.1 |
| UniParc:UPI0004EF1324 | UniProt:A0A078HRI3 | MapMan:35.1 | : | : | : |
Description
BnaC05g15190DBnaC05g15190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRI3]
Coordinates
chrLK032446:-:248818..256125
Molecular Weight (calculated)
26948.3 Da
IEP (calculated)
6.583
GRAVY (calculated)
-0.196
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSFPRVVRG KQDHLKFCTV SVRLSLTAEH FNPSDFGSER PANLSIASDV AGSNCFREQL SRHRALMNVF DKAPILDKEA FVTVILEDDH LFGDVNTDSV
101: GSGTNIQDNS LVHVAKSYLI GKVPPYHHHR GQCNHWLVIV LCYMDVLLKM RLLSRMGATL LDGVVVEKHD MVAAGARLFN KTLEFLPSGE SAENYSNLAK
201: AHAAENAKPL NATEFEKGQK DEEYDAMLGI VRETPPELKL STA
101: GSGTNIQDNS LVHVAKSYLI GKVPPYHHHR GQCNHWLVIV LCYMDVLLKM RLLSRMGATL LDGVVVEKHD MVAAGARLFN KTLEFLPSGE SAENYSNLAK
201: AHAAENAKPL NATEFEKGQK DEEYDAMLGI VRETPPELKL STA
001: MGTLGRAFYS VGFWIRETGQ ALDRLGCRLQ GKNYFREQLS RHRTLMNVFD KAPIVDKEAF VAPSASVIGD VHIGRGSSIW YGCVLRGDVN TVSVGSGTNI
101: QDNSLVHVAK SNLSGKVHPT IIGDNVTIGH SAVLHGCTVE DETFIGMGAT LLDGVVVEKH GMVAAGALVR QNTRIPSGEV WGGNPARFLR KLTDEEIAFI
201: SQSATNYSNL AQAHAAENAK PLNVIEFEKV LRKKHALKDE EYDSMLGIVR ETPPELNLPN NILPDKETKR PSNVN
101: QDNSLVHVAK SNLSGKVHPT IIGDNVTIGH SAVLHGCTVE DETFIGMGAT LLDGVVVEKH GMVAAGALVR QNTRIPSGEV WGGNPARFLR KLTDEEIAFI
201: SQSATNYSNL AQAHAAENAK PLNVIEFEKV LRKKHALKDE EYDSMLGIVR ETPPELNLPN NILPDKETKR PSNVN
Arabidopsis Description
GAMMACA1GAMMA CA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHZ1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.