Factsheet for Os12t0169700-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867
plastid: 27992503

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0642900-01	Rice	nucleus	94.87	94.87
Zm00001d022324_P001	Maize	mitochondrion	94.51	94.51
EER99796	Sorghum	mitochondrion	93.77	93.77
TraesCS2D01G148200.1	Wheat	mitochondrion	90.11	89.78
TraesCS2A01G144200.1	Wheat	mitochondrion	90.11	89.78
TraesCS2B01G169200.1	Wheat	golgi	89.38	89.05
KRH61146	Soybean	cytosol	80.95	80.07
KRH51833	Soybean	mitochondrion	79.49	79.49
PGSC0003DMT400009474	Potato	mitochondrion	77.66	77.66
Solyc04g080570.2.1	Tomato	plastid	77.29	77.29
GSMUA_Achr5P07890_001	Banana	mitochondrion	36.63	76.92
VIT_18s0001g12730.t01	Wine grape	cytosol	76.19	76.47
GSMUA_Achr5P07880_001	Banana	cytosol, mitochondrion, plastid	30.77	75.68
Solyc02g062600.2.1	Tomato	extracellular, nucleus	73.99	75.37
PGSC0003DMT400040041	Potato	cytosol, mitochondrion	73.99	75.37
KRH61144	Soybean	cytosol	58.97	73.85
AT1G19580.1	Thale cress	mitochondrion	73.99	73.45
HORVU2Hr1G025530.2	Barley	plastid	81.69	72.88
Bra016502.1-P	Field mustard	mitochondrion	70.33	71.38
CDX96658	Canola	mitochondrion	70.33	71.38
CDX83758	Canola	mitochondrion, plastid	70.33	71.38
Solyc02g085040.2.1	Tomato	extracellular	70.33	71.11
PGSC0003DMT400009047	Potato	mitochondrion	70.33	71.11
GSMUA_AchrUn_...	Banana	extracellular, golgi	42.49	70.3
KRH76755	Soybean	mitochondrion	68.13	68.89
VIT_04s0023g02060.t01	Wine grape	cytosol	57.14	68.42
KRH28712	Soybean	mitochondrion	67.4	68.15
Os01t0283100-01	Rice	mitochondrion	65.57	68.06
CDY50984	Canola	mitochondrion	60.81	63.85
Bra012077.1-P	Field mustard	mitochondrion	58.61	63.24
CDY45234	Canola	mitochondrion	58.24	62.85
AT5G66510.2	Thale cress	mitochondrion	61.9	62.83
CDY55089	Canola	mitochondrion	59.34	62.79
CDY30772	Canola	mitochondrion	58.24	61.87
GSMUA_Achr2P01940_001	Banana	cytosol	54.21	60.91
CDY59959	Canola	mitochondrion	15.02	57.75
CDY29419	Canola	cytosol	33.33	49.46
Bra025750.1-P	Field mustard	cytosol	31.87	48.88
CDY39368	Canola	mitochondrion	35.16	39.51
Os02t0508000-01	Rice	mitochondrion	17.58	18.6

Protein Annotations

EMBL:AK103904	EnsemblPlants:Os12t0169700-01	EnsemblPlantsGene:Os12g0169700	EntrezGene:4351619	Gene3D:2.160.10.10	InterPro:Hexapep
InterPro:Trimer_LpxA-like_sf	PANTHER:PTHR13061	PANTHER:PTHR13061:SF23	PFAM:PF00132	ProteinID:ABA95932.1	ProteinID:BAF29284.1
ProteinID:BAT16062.1	ProteinID:EAZ19787.1	RefSeq:XP_015619928.1	SUPFAM:SSF51161	UniParc:UPI000068197C	UniProt:Q2QX46
MapMan:2.4.1.4.6	:	:	:	:	:

Description

Similar to Ferripyochelin-binding protein-like. (Os12t0169700-01)

Coordinates

chr12:+:3549170..3552554

Molecular Weight (calculated)

29633.7 Da

IEP (calculated)

6.924

GRAVY (calculated)

-0.100

Length

273 amino acids

Sequence
(BLAST)

001: MGTLGRAIYT VGKWIRGTGQ AMDRLGSTIQ GGLRVEEQLS RHRTIMNIFE KEPRVHKDVF VAPSAAVIGD VEIGHGSSIW YGSILRGDVN SIHIGSGSNI
101: QDNSLVHVAK ANISGKVLPT IIGNNVTIGH SAVLHACTVE DEAFVGMGAT LLDGVVVEKH SMVGAGSLVK QNTRIPSGEV WVGNPAKFLR KLTEEEIAFI
201: AQSATNYINL AQVHAAENSK TFDEIELEKM LRKKYAHKDE EYDSMLGVVR EIPPELILPD NILPNKAQKA VAH

Best Arabidopsis Sequence Match ( AT1G47260.1 )
(BLAST)

001: MGTLGRAIYT VGNWIRGTGQ ALDRVGSLLQ GSHRIEEHLS RHRTLMNVFD KSPLVDKDVF VAPSASVIGD VQIGKGSSIW YGCVLRGDVN NISVGSGTNI
101: QDNTLVHVAK TNISGKVLPT LIGDNVTVGH SAVIHGCTVE DDAFVGMGAT LLDGVVVEKH AMVAAGSLVK QNTRIPSGEV WGGNPAKFMR KLTDEEIVYI
201: SQSAKNYINL AQIHASENSK SFEQIEVERA LRKKYARKDE DYDSMLGITR ETPPELILPD NVLPGGKPVA KVPSTQYF

Arabidopsis Description

GAMMACA2GAMMA CA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WI45]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.