Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012077.1-P | Field mustard | mitochondrion | 81.04 | 86.17 |
| CDY30772 | Canola | mitochondrion | 81.41 | 85.21 |
| CDY45234 | Canola | mitochondrion | 78.81 | 83.79 |
| CDY50984 | Canola | mitochondrion | 78.81 | 81.54 |
| CDY55089 | Canola | mitochondrion | 77.32 | 80.62 |
| AT1G19580.1 | Thale cress | mitochondrion | 74.35 | 72.73 |
| Solyc02g062600.2.1 | Tomato | extracellular, nucleus | 71.38 | 71.64 |
| HORVU6Hr1G050700.1 | Barley | cytosol, mitochondrion | 9.29 | 71.43 |
| PGSC0003DMT400040041 | Potato | cytosol, mitochondrion | 71.0 | 71.27 |
| KRH76755 | Soybean | mitochondrion | 71.38 | 71.11 |
| KRH28712 | Soybean | mitochondrion | 70.63 | 70.37 |
| TraesCS3D01G199500.1 | Wheat | cytosol | 68.03 | 69.85 |
| TraesCS7A01G107200.1 | Wheat | cytosol | 67.66 | 69.47 |
| TraesCS7D01G101600.1 | Wheat | cytosol | 67.66 | 69.47 |
| TraesCS3B01G224000.1 | Wheat | mitochondrion | 67.66 | 69.47 |
| TraesCS3A01G193500.1 | Wheat | cytosol | 67.66 | 69.47 |
| PGSC0003DMT400009047 | Potato | mitochondrion | 69.52 | 69.26 |
| Solyc02g085040.2.1 | Tomato | extracellular | 69.52 | 69.26 |
| TraesCS7B01G005800.1 | Wheat | cytosol | 67.29 | 69.08 |
| HORVU7Hr1G022550.1 | Barley | cytosol | 67.29 | 68.82 |
| Zm00001d040515_P001 | Maize | mitochondrion | 66.91 | 68.7 |
| EES00597 | Sorghum | mitochondrion | 66.91 | 68.44 |
| Os01t0283100-01 | Rice | mitochondrion | 66.54 | 68.06 |
| Zm00001d008215_P002 | Maize | mitochondrion | 66.54 | 65.09 |
| AT1G47260.1 | Thale cress | mitochondrion | 65.43 | 63.31 |
| Os12t0169700-01 | Rice | mitochondrion | 62.83 | 61.9 |
| VIT_04s0023g02060.t01 | Wine grape | cytosol | 52.42 | 61.84 |
| HORVU3Hr1G045750.1 | Barley | cytosol | 39.78 | 61.49 |
| HORVU3Hr1G045700.1 | Barley | cytosol | 39.78 | 61.49 |
| TraesCS2A01G144200.1 | Wheat | mitochondrion | 62.45 | 61.31 |
| TraesCS2D01G148200.1 | Wheat | mitochondrion | 62.45 | 61.31 |
| EER99796 | Sorghum | mitochondrion | 61.71 | 60.81 |
| TraesCS2B01G169200.1 | Wheat | golgi | 61.71 | 60.58 |
| Zm00001d022324_P001 | Maize | mitochondrion | 60.97 | 60.07 |
| Os07t0642900-01 | Rice | nucleus | 60.59 | 59.71 |
| HORVU3Hr1G045680.1 | Barley | cytosol, plastid | 64.68 | 53.54 |
| HORVU2Hr1G025530.2 | Barley | plastid | 56.88 | 50.0 |
| AT3G48680.1 | Thale cress | mitochondrion | 20.82 | 21.88 |
| AT5G63510.2 | Thale cress | mitochondrion | 20.07 | 19.35 |
Protein Annotations
| Gene3D:2.160.10.10 | MapMan:2.4.1.4.6 | EntrezGene:836783 | ProteinID:AED98223.1 | ArrayExpress:AT5G66510 | EnsemblPlantsGene:AT5G66510 |
| RefSeq:AT5G66510 | TAIR:AT5G66510 | RefSeq:AT5G66510-TAIR-G | EnsemblPlants:AT5G66510.2 | TAIR:AT5G66510.2 | Unigene:At.24265 |
| Symbol:GAMMA CA3 | InterPro:Hexapep | RefSeq:NP_001078808.1 | PFAM:PF00132 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR13061 | PANTHER:PTHR13061:SF9 |
| SUPFAM:SSF51161 | InterPro:Trimer_LpxA-like_sf | UniParc:UPI0001505652 | : | : | : |
Description
GAMMA CA3gamma carbonic anhydrase 3 [Source:TAIR;Acc:AT5G66510]
Coordinates
chr5:-:26549704..26551604
Molecular Weight (calculated)
29045.2 Da
IEP (calculated)
6.603
GRAVY (calculated)
-0.276
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTMGKAFYS VGFWIRETGQ ALDRLGCRLQ GKNHFREQLS RHRTLMNVFD KTPNVDKGAF VAPNASLSGD VHVGRGSSIW YGCVLRDIPF DLMTDSAGDA
101: NSISVGAGTN IQDNALVHVA KTNLSGKVLP TVIGDNVTIG HSAVLHGCTV EDEAYIGTSA TVLDGAHVEK HAMVASGALV RQNTRIPSGE VWGGNPAKFL
201: RKVTEEERVF FSSSAVEYSN LAQAHATENA KNLDEAEFKK LLNKKNARDT EYDSVLDDLT LPENVPKAA
101: NSISVGAGTN IQDNALVHVA KTNLSGKVLP TVIGDNVTIG HSAVLHGCTV EDEAYIGTSA TVLDGAHVEK HAMVASGALV RQNTRIPSGE VWGGNPAKFL
201: RKVTEEERVF FSSSAVEYSN LAQAHATENA KNLDEAEFKK LLNKKNARDT EYDSVLDDLT LPENVPKAA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.