Factsheet for AT3G48680.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018042.1-P	Field mustard	mitochondrion	94.92	94.92
CDY08089	Canola	mitochondrion	94.53	94.53
CDY05862	Canola	mitochondrion	93.36	94.47
AT5G63510.2	Thale cress	mitochondrion	85.55	78.49
VIT_17s0000g01240.t01	Wine grape	mitochondrion	71.48	74.69
KRH59820	Soybean	mitochondrion	73.44	74.31
KRH41125	Soybean	endoplasmic reticulum, mitochondrion	72.66	73.52
Solyc03g019720.2.1	Tomato	plastid	72.27	73.41
GSMUA_Achr2P06160_001	Banana	mitochondrion	72.27	73.12
PGSC0003DMT400039315	Potato	mitochondrion	71.48	72.62
Os02t0508000-01	Rice	mitochondrion	70.7	70.16
GSMUA_Achr6P27510_001	Banana	mitochondrion	68.75	70.12
TraesCS6D01G177500.2	Wheat	mitochondrion	69.92	69.92
TraesCS6B01G215700.2	Wheat	mitochondrion	69.92	69.92
TraesCS6A01G188800.2	Wheat	golgi	68.75	68.75
HORVU6Hr1G044700.2	Barley	mitochondrion	69.53	68.73
EES06863	Sorghum	mitochondrion	69.92	68.32
Zm00001d016566_P001	Maize	mitochondrion	69.14	59.8
AT5G66510.2	Thale cress	mitochondrion	21.88	20.82
AT1G19580.1	Thale cress	mitochondrion	20.7	19.27
AT1G47260.1	Thale cress	mitochondrion	20.7	19.06

Protein Annotations

Gene3D:2.160.10.10	MapMan:2.4.1.4.7	EntrezGene:824029	ProteinID:AEE78445.1	EMBL:AF360214	ArrayExpress:AT3G48680
EnsemblPlantsGene:AT3G48680	RefSeq:AT3G48680	TAIR:AT3G48680	RefSeq:AT3G48680-TAIR-G	EnsemblPlants:AT3G48680.1	TAIR:AT3G48680.1
EMBL:AY051017	Unigene:At.75571	ProteinID:CAB62357.1	Symbol:GAMMA CAL2	GO:GO:0000003	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005747	GO:GO:0005773	GO:GO:0005774	GO:GO:0006950	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009737	GO:GO:0009791	GO:GO:0009853	GO:GO:0009987	GO:GO:0010228
GO:GO:0016020	GO:GO:0031966	GO:GO:0045271	GO:GO:0046872	RefSeq:NP_190437.1	PO:PO:0000005
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR13061	PANTHER:PTHR13061:SF22	UniProt:Q9SMN1
SUPFAM:SSF51161	InterPro:Trimer_LpxA-like_sf	UniParc:UPI0000137C2F	SEG:seg	:	:

Description

GAMMACAL2Gamma carbonic anhydrase-like 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SMN1]

Coordinates

chr3:+:18034935..18037041

Molecular Weight (calculated)

27957.7 Da

IEP (calculated)

8.868

GRAVY (calculated)

0.041

Length

256 amino acids

Sequence
(BLAST)

001: MATSLARISK RSITSAVSSN LIRRYFAAEA VAVATTETPK PKSQVTPSPD RVKWDYRGQR QIIPLGQWLP KVAVDAYVAP NVVLAGQVTV WDGSSVWNGA
101: VLRGDLNKIT VGFCSNVQER CVVHAAWSSP TGLPAQTLID RYVTVGAYSL LRSCTIEPEC IIGQHSILME GSLVETRSIL EAGSVLPPGR RIPSGELWGG
201: NPARFIRTLT NEETLEIPKL AVAINHLSGD YFSEFLPYST IYLEVEKFKK SLGIAI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.