Factsheet for HORVU6Hr1G044700.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G188800.2	Wheat	golgi	88.8	89.84
TraesCS6D01G177500.2	Wheat	mitochondrion	87.64	88.67
TraesCS6B01G215700.2	Wheat	mitochondrion	87.26	88.28
Os02t0508000-01	Rice	mitochondrion	83.01	83.33
EES06863	Sorghum	mitochondrion	83.4	82.44
Zm00001d016566_P001	Maize	mitochondrion	84.17	73.65
GSMUA_Achr6P27510_001	Banana	mitochondrion	71.04	73.31
GSMUA_Achr2P06160_001	Banana	mitochondrion	70.66	72.33
VIT_17s0000g01240.t01	Wine grape	mitochondrion	68.34	72.24
CDY16720	Canola	mitochondrion	70.27	72.22
Bra038640.1-P	Field mustard	mitochondrion	69.88	71.83
CDY68990	Canola	mitochondrion	69.88	71.83
PGSC0003DMT400039315	Potato	mitochondrion	69.5	71.43
CDY31369	Canola	mitochondrion	69.5	71.43
CDX84424	Canola	mitochondrion	69.5	71.43
Bra029221.1-P	Field mustard	mitochondrion	69.5	71.43
Solyc03g019720.2.1	Tomato	plastid	69.11	71.03
CDY39864	Canola	mitochondrion	69.5	70.87
CDY05862	Canola	mitochondrion	69.11	70.75
KRH59820	Soybean	mitochondrion	67.95	69.57
Bra018042.1-P	Field mustard	mitochondrion	68.73	69.53
AT3G48680.1	Thale cress	mitochondrion	68.73	69.53
CDY08089	Canola	mitochondrion	68.73	69.53
KRH41125	Soybean	endoplasmic reticulum, mitochondrion	67.57	69.17
Bra035840.1-P	Field mustard	mitochondrion	69.5	68.97
CDY66238	Canola	mitochondrion	69.88	65.58
AT5G63510.2	Thale cress	mitochondrion	67.18	62.37
HORVU7Hr1G022550.1	Barley	cytosol	21.62	21.29
HORVU3Hr1G045750.1	Barley	cytosol	12.74	18.97
HORVU3Hr1G045700.1	Barley	cytosol	12.74	18.97
HORVU2Hr1G025530.2	Barley	plastid	21.24	17.97
HORVU3Hr1G045680.1	Barley	cytosol, plastid	21.62	17.23
HORVU6Hr1G050700.1	Barley	cytosol, mitochondrion	0.39	2.86

Protein Annotations

EMBL:AK359242	EMBL:AK369191	EMBL:AK376232	EnsemblPlants:HORVU6Hr1G044700.2	EnsemblPlantsGene:HORVU6Hr1G044700	Gene3D:2.160.10.10
InterPro:Trimer_LpxA-like_sf	PANTHER:PTHR13061	PANTHER:PTHR13061:SF22	SEG:seg	SUPFAM:SSF51161	UniParc:UPI0002005C0A
UniProt:F2D5T2	MapMan:2.4.1.4.7	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D5T2]

Coordinates

chrchr6H:-:257176795..257214644

Molecular Weight (calculated)

27593.2 Da

IEP (calculated)

8.210

GRAVY (calculated)

0.114

Length

259 amino acids

Sequence
(BLAST)

001: MAAASLSRLS RRASAAAAPS LRRILSSTAT ACPSPAAPSS SPPPVAAAAA GADRVRWDYR GQRQLVPLGQ WLPKVAVDAY VAPEAVLAGQ VTVHDGASVW
101: SGSVLRGDLN KITLGFCANV QERSVLHAAW SASTGLPAET LVDRYVTVGA YCLLRSCTIE PECIIGQHSI LMEGSLVETN SVLEAGSVLA PGRRIPTGEL
201: WAGNPARFVR KLTNEEIMEI PKLAVAINDL MQSHFSEFLP YSNAYLEVEK LKKSFSIPL

Best Arabidopsis Sequence Match ( AT3G48680.1 )
(BLAST)

001: MATSLARISK RSITSAVSSN LIRRYFAAEA VAVATTETPK PKSQVTPSPD RVKWDYRGQR QIIPLGQWLP KVAVDAYVAP NVVLAGQVTV WDGSSVWNGA
101: VLRGDLNKIT VGFCSNVQER CVVHAAWSSP TGLPAQTLID RYVTVGAYSL LRSCTIEPEC IIGQHSILME GSLVETRSIL EAGSVLPPGR RIPSGELWGG
201: NPARFIRTLT NEETLEIPKL AVAINHLSGD YFSEFLPYST IYLEVEKFKK SLGIAI

Arabidopsis Description

GAMMACAL2Gamma carbonic anhydrase-like 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SMN1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.