Factsheet for Bra038640.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68990	Canola	mitochondrion	99.21	99.21
Bra029221.1-P	Field mustard	mitochondrion	93.65	93.65
Bra018042.1-P	Field mustard	mitochondrion	92.06	90.62
Bra035840.1-P	Field mustard	mitochondrion	87.7	84.67
AT5G63510.2	Thale cress	mitochondrion	88.1	79.57
KRH59820	Soybean	mitochondrion	76.59	76.28
VIT_17s0000g01240.t01	Wine grape	mitochondrion	73.41	75.51
KRH41125	Soybean	endoplasmic reticulum, mitochondrion	75.4	75.1
Solyc03g019720.2.1	Tomato	plastid	74.21	74.21
PGSC0003DMT400039315	Potato	mitochondrion	73.81	73.81
GSMUA_Achr2P06160_001	Banana	mitochondrion	73.81	73.52
Os02t0508000-01	Rice	mitochondrion	73.02	71.32
GSMUA_Achr6P27510_001	Banana	mitochondrion	71.03	71.31
TraesCS6B01G215700.2	Wheat	mitochondrion	71.43	70.31
TraesCS6D01G177500.2	Wheat	mitochondrion	71.43	70.31
TraesCS6A01G188800.2	Wheat	golgi	71.43	70.31
HORVU6Hr1G044700.2	Barley	mitochondrion	71.83	69.88
EES06863	Sorghum	mitochondrion	72.22	69.47
Zm00001d016566_P001	Maize	mitochondrion	71.43	60.81
Bra012077.1-P	Field mustard	mitochondrion	22.62	22.53
Bra016502.1-P	Field mustard	mitochondrion	21.43	20.07
Bra032216.1-P	Field mustard	mitochondrion	20.63	18.84
Bra014069.1-P	Field mustard	mitochondrion	15.08	15.97
Bra025750.1-P	Field mustard	cytosol	11.11	15.73

Protein Annotations

EnsemblPlants:Bra038640.1	EnsemblPlants:Bra038640.1-P	EnsemblPlantsGene:Bra038640	Gene3D:2.160.10.10	InterPro:Trimer_LpxA-like_sf	PANTHER:PTHR13061
PANTHER:PTHR13061:SF22	SEG:seg	SUPFAM:SSF51161	UniParc:UPI000253F2B4	UniProt:M4FC24	MapMan:2.4.1.4.7

Description

AT5G63510 (E=5e-129) GAMMA CAL1 | GAMMA CAL1 (GAMMA CARBONIC ANHYDRASE LIKE 1); carbonate dehydratase

Coordinates

chrA06:+:14318697..14319663

Molecular Weight (calculated)

27572.2 Da

IEP (calculated)

8.598

GRAVY (calculated)

0.044

Length

252 amino acids

Sequence
(BLAST)

001: MATSIARFSR RGVASNLIRR YFAAEAAVAV KTEAPKPQLT VSPSPDRVKW DYRGQRQIIP LGQWLPKVAV DAYVAPNVVL AGQVTVWDGS SVWNGAVLRG
101: DLNKITLGFC SNVQERCVVH AAWSSPTGLP AETLIDRYVT VGAYSLLRSC TIEPECIIGQ HSILMEGSLV ETRSILEAGS VVPPGRRIPS GELWGGNPAR
201: FIRTLTNEET LEIPKLAVAI NHLSGDYFSE FLPYSTVYLE VEKFKKSLGI SV

Best Arabidopsis Sequence Match ( AT5G63510.1 )
(BLAST)

001: MATSIARLSR RGVTSNLIRR CFAAEAALAR KTELPKPQFT VSPSTDRVKW DYRGQRQIIP LGQWLPKVAV DAYVAPNVVL AGQVTVWDGS SVWNGAVLRG
101: DLNKITVGFC SNVQERCVVH AAWSSPTGLP AATIIDRYVT VGAYSLLRSC TIEPECIIGQ HSILMEGSLV ETRSILEAGS VVPPGRRIPS GELWGGNPAR
201: FIRTLTNEET LEIPKLAVAI NHLSGDYFSE FLPYSTVYLE VEKFKKSLGI AV

Arabidopsis Description

GAMMA CAL1Gamma carbonic anhydrase like 1 [Source:UniProtKB/TrEMBL;Acc:F4KAQ8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.