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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 9
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31369 Canola mitochondrion 100.0 100.0
Bra038640.1-P Field mustard mitochondrion 93.65 93.65
Bra018042.1-P Field mustard mitochondrion 90.08 88.67
Bra035840.1-P Field mustard mitochondrion 86.9 83.91
AT5G63510.2 Thale cress mitochondrion 86.51 78.14
VIT_17s0000g01240.t01 Wine grape mitochondrion 73.02 75.1
KRH59820 Soybean mitochondrion 75.0 74.7
KRH41125 Soybean endoplasmic reticulum, mitochondrion 73.81 73.52
GSMUA_Achr2P06160_001 Banana mitochondrion 73.02 72.73
PGSC0003DMT400039315 Potato mitochondrion 71.83 71.83
Solyc03g019720.2.1 Tomato plastid 71.43 71.43
Os02t0508000-01 Rice mitochondrion 73.02 71.32
TraesCS6A01G188800.2 Wheat golgi 71.43 70.31
GSMUA_Achr6P27510_001 Banana mitochondrion 69.84 70.12
TraesCS6B01G215700.2 Wheat mitochondrion 71.03 69.92
TraesCS6D01G177500.2 Wheat mitochondrion 71.03 69.92
HORVU6Hr1G044700.2 Barley mitochondrion 71.43 69.5
EES06863 Sorghum mitochondrion 71.83 69.08
Zm00001d016566_P001 Maize mitochondrion 71.43 60.81
Bra012077.1-P Field mustard mitochondrion 22.22 22.13
Bra016502.1-P Field mustard mitochondrion 21.43 20.07
Bra032216.1-P Field mustard mitochondrion 20.63 18.84
Bra014069.1-P Field mustard mitochondrion 15.48 16.39
Bra025750.1-P Field mustard cytosol 11.51 16.29
Protein Annotations
EnsemblPlants:Bra029221.1EnsemblPlants:Bra029221.1-PEnsemblPlantsGene:Bra029221Gene3D:2.160.10.10InterPro:Trimer_LpxA-like_sfPANTHER:PTHR13061
PANTHER:PTHR13061:SF22SUPFAM:SSF51161UniParc:UPI0002545F7AUniProt:M4EKA4MapMan:2.4.1.4.7:
Description
AT5G63510 (E=5e-132) GAMMA CAL1 | GAMMA CAL1 (GAMMA CARBONIC ANHYDRASE LIKE 1); carbonate dehydratase
Coordinates
chrA02:+:26473395..26475105
Molecular Weight (calculated)
27528.2 Da
IEP (calculated)
8.887
GRAVY (calculated)
0.027
Length
252 amino acids
Sequence
(BLAST)
001: MATSIARFSR RALTPNPIRR FFATSAALAT NTEAPKPKLT VSPSPDRAKW DYRGQRQIIP LGQWLPKVAV DAYVAPNVVL AGQVTVWDGS SVWNGAVLRG
101: DLNKITLGFC ANVQERCVVH AAWSSPTGLP AETLIDRYVT VGAYSLLRSC TIEPECIIGQ HSILMEGSLV ETRSILEAGS VVPPGRRIPS GELWGGNPAR
201: FIRTLTNEET LEISKLAVAI NHLSGDYFSE FLPYSTVYLE VEKFKKSLGI AV
Best Arabidopsis Sequence Match ( AT5G63510.1 )
(BLAST)
001: MATSIARLSR RGVTSNLIRR CFAAEAALAR KTELPKPQFT VSPSTDRVKW DYRGQRQIIP LGQWLPKVAV DAYVAPNVVL AGQVTVWDGS SVWNGAVLRG
101: DLNKITVGFC SNVQERCVVH AAWSSPTGLP AATIIDRYVT VGAYSLLRSC TIEPECIIGQ HSILMEGSLV ETRSILEAGS VVPPGRRIPS GELWGGNPAR
201: FIRTLTNEET LEIPKLAVAI NHLSGDYFSE FLPYSTVYLE VEKFKKSLGI AV
Arabidopsis Description
GAMMA CAL1Gamma carbonic anhydrase like 1 [Source:UniProtKB/TrEMBL;Acc:F4KAQ8]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.