CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029221.1-P	Field mustard	mitochondrion	100.0	100.0
CDY39864	Canola	mitochondrion	98.02	97.24
CDY68990	Canola	mitochondrion	93.65	93.65
CDY16720	Canola	mitochondrion	93.25	93.25
CDX84424	Canola	mitochondrion	92.86	92.86
CDY05862	Canola	mitochondrion	90.48	90.12
CDY08089	Canola	mitochondrion	89.68	88.28
CDY66238	Canola	mitochondrion	92.86	84.78
AT5G63510.2	Thale cress	mitochondrion	86.51	78.14
VIT_17s0000g01240.t01	Wine grape	mitochondrion	73.02	75.1
KRH59820	Soybean	mitochondrion	75.0	74.7
KRH41125	Soybean	endoplasmic reticulum, mitochondrion	73.81	73.52
GSMUA_Achr2P06160_001	Banana	mitochondrion	73.02	72.73
PGSC0003DMT400039315	Potato	mitochondrion	71.83	71.83
Solyc03g019720.2.1	Tomato	plastid	71.43	71.43
Os02t0508000-01	Rice	mitochondrion	73.02	71.32
TraesCS6A01G188800.2	Wheat	golgi	71.43	70.31
GSMUA_Achr6P27510_001	Banana	mitochondrion	69.84	70.12
TraesCS6B01G215700.2	Wheat	mitochondrion	71.03	69.92
TraesCS6D01G177500.2	Wheat	mitochondrion	71.03	69.92
HORVU6Hr1G044700.2	Barley	mitochondrion	71.43	69.5
EES06863	Sorghum	mitochondrion	71.83	69.08
Zm00001d016566_P001	Maize	mitochondrion	71.43	60.81
CDY50984	Canola	mitochondrion	23.81	23.08
CDY55089	Canola	mitochondrion	23.41	22.87
CDY45234	Canola	mitochondrion	21.83	21.74
CDY30772	Canola	mitochondrion	21.83	21.4
CDX96658	Canola	mitochondrion	21.43	20.07
CDX83758	Canola	mitochondrion, plastid	21.43	20.07
CDY47592	Canola	mitochondrion	21.03	19.2
CDY17034	Canola	mitochondrion	21.03	19.2
CDY67628	Canola	mitochondrion	20.63	18.84
CDY23649	Canola	mitochondrion	20.63	18.77
CDY29419	Canola	cytosol	11.51	15.76
CDY39368	Canola	mitochondrion	10.71	11.11
CDY59959	Canola	mitochondrion	2.78	9.86

Protein Annotations

EnsemblPlants:CDY31369	EnsemblPlantsGene:GSBRNA2T00047562001	Gene3D:2.160.10.10	InterPro:Trimer_LpxA-like_sf	PANTHER:PTHR13061	PANTHER:PTHR13061:SF22
ProteinID:CDY31369	ProteinID:CDY31369.1	SUPFAM:SSF51161	UniParc:UPI0002545F7A	UniProt:A0A078H1P5	MapMan:2.4.1.4.7

Description

BnaA02g33720DBnaA02g33720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1P5]

Coordinates

chrLK032270:-:465006..466958

Molecular Weight (calculated)

27528.2 Da

IEP (calculated)

8.887

GRAVY (calculated)

0.027

Length

252 amino acids

Sequence
(BLAST)

001: MATSIARFSR RALTPNPIRR FFATSAALAT NTEAPKPKLT VSPSPDRAKW DYRGQRQIIP LGQWLPKVAV DAYVAPNVVL AGQVTVWDGS SVWNGAVLRG
101: DLNKITLGFC ANVQERCVVH AAWSSPTGLP AETLIDRYVT VGAYSLLRSC TIEPECIIGQ HSILMEGSLV ETRSILEAGS VVPPGRRIPS GELWGGNPAR
201: FIRTLTNEET LEISKLAVAI NHLSGDYFSE FLPYSTVYLE VEKFKKSLGI AV

Best Arabidopsis Sequence Match ( AT5G63510.1 )
(BLAST)

001: MATSIARLSR RGVTSNLIRR CFAAEAALAR KTELPKPQFT VSPSTDRVKW DYRGQRQIIP LGQWLPKVAV DAYVAPNVVL AGQVTVWDGS SVWNGAVLRG
101: DLNKITVGFC SNVQERCVVH AAWSSPTGLP AATIIDRYVT VGAYSLLRSC TIEPECIIGQ HSILMEGSLV ETRSILEAGS VVPPGRRIPS GELWGGNPAR
201: FIRTLTNEET LEIPKLAVAI NHLSGDYFSE FLPYSTVYLE VEKFKKSLGI AV

Arabidopsis Description

GAMMA CAL1Gamma carbonic anhydrase like 1 [Source:UniProtKB/TrEMBL;Acc:F4KAQ8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.