Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80126 | Canola | cytosol | 73.64 | 97.59 |
| Bra007701.1-P | Field mustard | cytosol | 71.82 | 95.18 |
| KRH68191 | Soybean | cytosol | 64.55 | 86.59 |
| KRG96447 | Soybean | cytosol | 62.73 | 84.15 |
| Solyc11g005880.1.1 | Tomato | cytosol | 59.09 | 77.38 |
| PGSC0003DMT400073819 | Potato | cytosol | 59.09 | 76.47 |
| VIT_05s0077g02340.t01 | Wine grape | cytosol | 60.0 | 75.86 |
| EES15199 | Sorghum | cytosol | 58.18 | 74.42 |
| TraesCS7D01G277200.1 | Wheat | cytosol | 58.18 | 74.42 |
| HORVU7Hr1G058490.1 | Barley | cytosol | 58.18 | 74.42 |
| TraesCS7B01G174900.1 | Wheat | cytosol | 58.18 | 74.42 |
| TraesCS7A01G277200.1 | Wheat | cytosol | 58.18 | 74.42 |
| Zm00001d031975_P001 | Maize | mitochondrion | 57.27 | 73.26 |
| Os08t0556600-01 | Rice | plastid | 58.18 | 71.11 |
| AT2G47690.1 | Thale cress | cytosol | 69.09 | 64.41 |
| Bra003510.1-P | Field mustard | cytosol | 59.09 | 48.87 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 36.36 | 40.4 |
Protein Annotations
| EnsemblPlants:Bra004437.1 | EnsemblPlants:Bra004437.1-P | EnsemblPlantsGene:Bra004437 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 | GO:GO:0016020 | GO:GO:0031966 | GO:GO:0045271 |
| InterPro:NADH_UbQ_OxRdtase_FeS-su5 | PANTHER:PTHR15224 | PFAM:PF10200 | PFscan:PS51808 | UniParc:UPI0002547FD4 | UniProt:M4CJQ3 |
| MapMan:2.4.1.4.4 | : | : | : | : | : |
Description
AT3G62790 (E=3e-045) | NADH-ubiquinone oxidoreductase-related
Coordinates
chrA05:-:109663..110473
Molecular Weight (calculated)
13125.8 Da
IEP (calculated)
9.097
GRAVY (calculated)
-0.727
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGWGITGN KGRCYDFWMD FSQCMSHCRE PKDCSLLRED YLECLHHSKE FQRRNRIYKE EQRKLRAASR KGEQVVDATH THHWSPIFLQ VCFFIPIPDK
101: KNKSKILHLV
101: KNKSKILHLV
1: MASGWGITGN KGRCYDFWMD FSECMSHCRE PKDCTLLRED YLECLHHSKE FQRRNRIYKE EQRKLRAASR KGEETGDGTH THH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.