Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53012 | Canola | cytosol | 97.59 | 97.59 |
| CDX76662 | Canola | cytosol | 92.77 | 92.77 |
| CDY11448 | Canola | cytosol | 92.77 | 92.77 |
| KRH68191 | Soybean | cytosol | 85.54 | 86.59 |
| KRG96447 | Soybean | cytosol | 83.13 | 84.15 |
| CDX67904 | Canola | cytosol | 80.72 | 78.82 |
| Solyc11g005880.1.1 | Tomato | cytosol | 79.52 | 78.57 |
| PGSC0003DMT400073819 | Potato | cytosol | 79.52 | 77.65 |
| CDY25118 | Canola | cytosol | 79.52 | 76.74 |
| VIT_05s0077g02340.t01 | Wine grape | cytosol | 79.52 | 75.86 |
| Bra004437.1-P | Field mustard | cytosol | 97.59 | 73.64 |
| HORVU7Hr1G058490.1 | Barley | cytosol | 75.9 | 73.26 |
| EES15199 | Sorghum | cytosol | 75.9 | 73.26 |
| TraesCS7A01G277200.1 | Wheat | cytosol | 75.9 | 73.26 |
| TraesCS7B01G174900.1 | Wheat | cytosol | 75.9 | 73.26 |
| TraesCS7D01G277200.1 | Wheat | cytosol | 75.9 | 73.26 |
| Zm00001d031975_P001 | Maize | mitochondrion | 74.7 | 72.09 |
| Os08t0556600-01 | Rice | plastid | 75.9 | 70.0 |
| AT2G47690.1 | Thale cress | cytosol | 91.57 | 64.41 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 45.78 | 38.38 |
Protein Annotations
| EnsemblPlants:CDX80126 | EnsemblPlantsGene:GSBRNA2T00133032001 | InterPro:NADH_UbQ_OxRdtase_FeS-su5 | PANTHER:PTHR15224 | PFAM:PF10200 | PFscan:PS51808 |
| ProteinID:CDX80126 | ProteinID:CDX80126.1 | UniParc:UPI0004EE6615 | MapMan:2.4.1.4.4 | : | : |
Description
BnaA05g00300D
Coordinates
chrLK031819:+:2029893..2030912
Molecular Weight (calculated)
9887.7 Da
IEP (calculated)
8.503
GRAVY (calculated)
-1.106
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: MASGWGITGN KGRCYDFWMD FSQCMSHCRE PKDCSLLRED YLECLHHSKE FQRRNRIYKE EQRKLRAASR KGEQVVDGAH THH
1: MASGWGITGN KGRCYDFWMD FSECMSHCRE PKDCTLLRED YLECLHHSKE FQRRNRIYKE EQRKLRAASR KGEETGDGTH THH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.