Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25118 | Canola | cytosol | 91.76 | 90.7 |
| KRH68191 | Soybean | cytosol | 80.0 | 82.93 |
| CDX76662 | Canola | cytosol | 80.0 | 81.93 |
| CDY11448 | Canola | cytosol | 80.0 | 81.93 |
| CDY53012 | Canola | cytosol | 80.0 | 81.93 |
| AT3G62790.1 | Thale cress | cytosol | 78.82 | 80.72 |
| CDX80126 | Canola | cytosol | 78.82 | 80.72 |
| KRG96447 | Soybean | cytosol | 77.65 | 80.49 |
| Solyc11g005880.1.1 | Tomato | cytosol | 76.47 | 77.38 |
| PGSC0003DMT400073819 | Potato | cytosol | 75.29 | 75.29 |
| VIT_05s0077g02340.t01 | Wine grape | cytosol | 75.29 | 73.56 |
| EES15199 | Sorghum | cytosol | 69.41 | 68.6 |
| Zm00001d031975_P001 | Maize | mitochondrion | 68.24 | 67.44 |
| TraesCS7D01G277200.1 | Wheat | cytosol | 68.24 | 67.44 |
| TraesCS7B01G174900.1 | Wheat | cytosol | 68.24 | 67.44 |
| TraesCS7A01G277200.1 | Wheat | cytosol | 68.24 | 67.44 |
| HORVU7Hr1G058490.1 | Barley | cytosol | 68.24 | 67.44 |
| Os08t0556600-01 | Rice | plastid | 70.59 | 66.67 |
| Bra003510.1-P | Field mustard | cytosol | 97.65 | 62.41 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 45.88 | 39.39 |
Protein Annotations
| EnsemblPlants:CDX67904 | EnsemblPlantsGene:GSBRNA2T00099110001 | InterPro:NADH_UbQ_OxRdtase_FeS-su5 | PANTHER:PTHR15224 | PFAM:PF10200 | PFscan:PS51808 |
| ProteinID:CDX67904 | ProteinID:CDX67904.1 | UniParc:UPI0004EE7A0F | MapMan:2.4.1.4.4 | : | : |
Description
BnaA07g19440D
Coordinates
chrLK031787:-:2819978..2821055
Molecular Weight (calculated)
9971.6 Da
IEP (calculated)
8.226
GRAVY (calculated)
-1.206
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MASGWGITGN KGRCYDFWMD FSECMSHCRE PKDCSLLRED YLECLHHSKE FQRRNRIYKE EQRKLRAASK KGQDTGGDAT HTSNH
1: MASGWGITGN KGRCYDFWMD FSECMSHCRE PKDCTLLRED YLECLHHSKE FQRRNRIYKE EQRKLRAASR KGEETGDGTH THH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.