Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67904 | Canola | cytosol | 62.41 | 97.65 |
| KRH68191 | Soybean | cytosol | 49.62 | 80.49 |
| Bra007701.1-P | Field mustard | cytosol | 49.62 | 79.52 |
| AT3G62790.1 | Thale cress | cytosol | 48.87 | 78.31 |
| KRG96447 | Soybean | cytosol | 48.12 | 78.05 |
| Solyc11g005880.1.1 | Tomato | cytosol | 47.37 | 75.0 |
| PGSC0003DMT400073819 | Potato | cytosol | 46.62 | 72.94 |
| VIT_05s0077g02340.t01 | Wine grape | cytosol | 46.62 | 71.26 |
| Zm00001d031975_P001 | Maize | mitochondrion | 43.61 | 67.44 |
| EES15199 | Sorghum | cytosol | 42.86 | 66.28 |
| HORVU7Hr1G058490.1 | Barley | cytosol | 42.11 | 65.12 |
| TraesCS7A01G277200.1 | Wheat | cytosol | 42.11 | 65.12 |
| TraesCS7B01G174900.1 | Wheat | cytosol | 42.11 | 65.12 |
| TraesCS7D01G277200.1 | Wheat | cytosol | 42.11 | 65.12 |
| Os08t0556600-01 | Rice | plastid | 43.61 | 64.44 |
| Bra004437.1-P | Field mustard | cytosol | 48.87 | 59.09 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 30.08 | 40.4 |
Protein Annotations
Description
AT2G47690 (E=1e-026) | NADH-ubiquinone oxidoreductase-related
Coordinates
chrA07:-:13527225..13528006
Molecular Weight (calculated)
15241.0 Da
IEP (calculated)
9.053
GRAVY (calculated)
-0.793
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGWGITGN KGRCYDCWME FSECMSHCRE PKDCSLLRED YLECLHHSKE VPTPYLSLAL AGFVKSPIHA RRLLRSVFNF DYSNPDQFGK KSSAHLLGFQ
101: RRNRIYKEEQ RKLRAASKKG QDTGGDATHT SNH
101: RRNRIYKEEQ RKLRAASKKG QDTGGDATHT SNH
1: MASGWGITGN KGRCYDFWMD FSECMSHCRE PKDCTLLRED YLECLHHSKE FQRRNRIYKE EQRKLRAASR KGEETGDGTH THH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.