Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007701.1-P | Field mustard | cytosol | 97.59 | 97.59 |
| CDX76662 | Canola | cytosol | 97.59 | 97.59 |
| CDY11448 | Canola | cytosol | 97.59 | 97.59 |
| KRH68191 | Soybean | cytosol | 85.54 | 86.59 |
| KRG96447 | Soybean | cytosol | 83.13 | 84.15 |
| Solyc11g005880.1.1 | Tomato | cytosol | 81.93 | 80.95 |
| PGSC0003DMT400073819 | Potato | cytosol | 81.93 | 80.0 |
| CDX67904 | Canola | cytosol | 80.72 | 78.82 |
| CDY25118 | Canola | cytosol | 79.52 | 76.74 |
| VIT_05s0077g02340.t01 | Wine grape | cytosol | 79.52 | 75.86 |
| EES15199 | Sorghum | cytosol | 78.31 | 75.58 |
| Zm00001d031975_P001 | Maize | mitochondrion | 77.11 | 74.42 |
| TraesCS7D01G277200.1 | Wheat | cytosol | 77.11 | 74.42 |
| TraesCS7B01G174900.1 | Wheat | cytosol | 77.11 | 74.42 |
| TraesCS7A01G277200.1 | Wheat | cytosol | 77.11 | 74.42 |
| HORVU7Hr1G058490.1 | Barley | cytosol | 77.11 | 74.42 |
| Os08t0556600-01 | Rice | plastid | 78.31 | 72.22 |
| AT2G47690.1 | Thale cress | cytosol | 97.59 | 68.64 |
| Bra003510.1-P | Field mustard | cytosol | 78.31 | 48.87 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 45.78 | 38.38 |
Protein Annotations
| MapMan:2.4.1.4.4 | EntrezGene:825454 | UniProt:A0A178VCL7 | ProteinID:AEE80392.1 | ArrayExpress:AT3G62790 | EnsemblPlantsGene:AT3G62790 |
| RefSeq:AT3G62790 | TAIR:AT3G62790 | RefSeq:AT3G62790-TAIR-G | EnsemblPlants:AT3G62790.1 | TAIR:AT3G62790.1 | EMBL:AY062842 |
| EMBL:AY088460 | EMBL:AY114576 | Unigene:At.22306 | ProteinID:CAB83129.1 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0005747 | GO:GO:0005758 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0032981 |
| GO:GO:0055114 | GO:GO:0070469 | InterPro:NADH_UbQ_OxRdtase_FeS-su5 | RefSeq:NP_191838.1 | ProteinID:OAP03564.1 | PFAM:PF10200 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51808 | PANTHER:PTHR15224 | UniProt:Q9LZI6 |
| UniParc:UPI000009EAEB | : | : | : | : | : |
Description
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI6]
Coordinates
chr3:-:23223030..23224326
Molecular Weight (calculated)
9893.6 Da
IEP (calculated)
7.913
GRAVY (calculated)
-1.249
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: MASGWGITGN KGRCYDFWMD FSECMSHCRE PKDCTLLRED YLECLHHSKE FQRRNRIYKE EQRKLRAASR KGEETGDGTH THH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.