Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G62790.1 | Thale cress | cytosol | 68.64 | 97.59 |
| CDY53012 | Canola | cytosol | 66.1 | 93.98 |
| CDX80126 | Canola | cytosol | 64.41 | 91.57 |
| KRH68191 | Soybean | cytosol | 60.17 | 86.59 |
| KRG96447 | Soybean | cytosol | 58.47 | 84.15 |
| Solyc11g005880.1.1 | Tomato | cytosol | 57.63 | 80.95 |
| PGSC0003DMT400073819 | Potato | cytosol | 57.63 | 80.0 |
| VIT_05s0077g02340.t01 | Wine grape | cytosol | 55.93 | 75.86 |
| EES15199 | Sorghum | cytosol | 55.08 | 75.58 |
| Zm00001d031975_P001 | Maize | mitochondrion | 54.24 | 74.42 |
| TraesCS7D01G277200.1 | Wheat | cytosol | 54.24 | 74.42 |
| TraesCS7B01G174900.1 | Wheat | cytosol | 54.24 | 74.42 |
| TraesCS7A01G277200.1 | Wheat | cytosol | 54.24 | 74.42 |
| HORVU7Hr1G058490.1 | Barley | cytosol | 54.24 | 74.42 |
| Os08t0556600-01 | Rice | plastid | 55.08 | 72.22 |
| Bra004437.1-P | Field mustard | cytosol | 64.41 | 69.09 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 33.05 | 39.39 |
Protein Annotations
| MapMan:2.4.1.4.4 | EntrezGene:819382 | ProteinID:AAC63625.1 | ProteinID:AEC10876.1 | EMBL:AK228285 | ArrayExpress:AT2G47690 |
| EnsemblPlantsGene:AT2G47690 | RefSeq:AT2G47690 | TAIR:AT2G47690 | RefSeq:AT2G47690-TAIR-G | EnsemblPlants:AT2G47690.1 | TAIR:AT2G47690.1 |
| Unigene:At.36327 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005743 | GO:GO:0005747 | GO:GO:0005758 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009853 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0031966 | GO:GO:0032981 | GO:GO:0045271 |
| GO:GO:0055114 | GO:GO:0070469 | InterPro:NADH_UbQ_OxRdtase_FeS-su5 | RefSeq:NP_182291.1 | UniProt:O82238 | PFAM:PF10200 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS51808 | PANTHER:PTHR15224 | UniParc:UPI00000A8834 | : | : |
Description
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A [Source:UniProtKB/Swiss-Prot;Acc:O82238]
Coordinates
chr2:+:19551195..19552358
Molecular Weight (calculated)
13965.4 Da
IEP (calculated)
6.613
GRAVY (calculated)
-0.918
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MDISGHPKTR TRTIFDEVDE PVWFCCVLPI WVGEEMASGW GITGNKGRCY DFWMDFSECM SHCREPKDCT LLREDYLECL HHSKEFQRRN RIYKEEQRKL
101: RAASRKGEEA GDGTHNHH
101: RAASRKGEEA GDGTHNHH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.