Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15199 | Sorghum | cytosol | 80.46 | 81.4 |
| Bra007701.1-P | Field mustard | cytosol | 77.01 | 80.72 |
| CDX76662 | Canola | cytosol | 77.01 | 80.72 |
| CDY11448 | Canola | cytosol | 77.01 | 80.72 |
| CDY53012 | Canola | cytosol | 77.01 | 80.72 |
| Zm00001d031975_P001 | Maize | mitochondrion | 79.31 | 80.23 |
| TraesCS7D01G277200.1 | Wheat | cytosol | 79.31 | 80.23 |
| TraesCS7B01G174900.1 | Wheat | cytosol | 79.31 | 80.23 |
| TraesCS7A01G277200.1 | Wheat | cytosol | 79.31 | 80.23 |
| HORVU7Hr1G058490.1 | Barley | cytosol | 79.31 | 80.23 |
| CDX80126 | Canola | cytosol | 75.86 | 79.52 |
| AT3G62790.1 | Thale cress | cytosol | 75.86 | 79.52 |
| KRH68191 | Soybean | cytosol | 74.71 | 79.27 |
| Solyc11g005880.1.1 | Tomato | cytosol | 75.86 | 78.57 |
| KRG96447 | Soybean | cytosol | 73.56 | 78.05 |
| PGSC0003DMT400073819 | Potato | cytosol | 75.86 | 77.65 |
| CDY25118 | Canola | cytosol | 74.71 | 75.58 |
| CDX67904 | Canola | cytosol | 73.56 | 75.29 |
| Os08t0556600-01 | Rice | plastid | 73.56 | 71.11 |
| Bra004437.1-P | Field mustard | cytosol | 75.86 | 60.0 |
| AT2G47690.1 | Thale cress | cytosol | 75.86 | 55.93 |
| Bra003510.1-P | Field mustard | cytosol | 71.26 | 46.62 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 44.83 | 39.39 |
Protein Annotations
| EntrezGene:100248164 | MapMan:2.4.1.4.4 | ProteinID:CCB48038 | ProteinID:CCB48038.1 | UniProt:F6H6Y8 | EMBL:FN595246 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0032981 | InterPro:NADH_UbQ_OxRdtase_FeS-su5 |
| PFAM:PF10200 | PFscan:PS51808 | PANTHER:PTHR15224 | TIGR:TC60658 | TIGR:TC62156 | UniParc:UPI00019831CC |
| ArrayExpress:VIT_05s0077g02340 | EnsemblPlantsGene:VIT_05s0077g02340 | EnsemblPlants:VIT_05s0077g02340.t01 | unigene:Vvi.2150 | RefSeq:XP_010649587.1 | SEG:seg |
Description
No Description!
Coordinates
chr5:+:1857725..1859407
Molecular Weight (calculated)
10198.9 Da
IEP (calculated)
7.884
GRAVY (calculated)
-1.214
Length
87 amino acids
Sequence
(BLAST)
(BLAST)
1: MASGWGITGS KGRCYDFWTD FSECMSRCRE PKDCSLLRED YLECLHHSKE FQRRNRIYKE EQRQIRAAAR KAKGEGEGED GVQNSHH
001: MDISGHPKTR TRTIFDEVDE PVWFCCVLPI WVGEEMASGW GITGNKGRCY DFWMDFSECM SHCREPKDCT LLREDYLECL HHSKEFQRRN RIYKEEQRKL
101: RAASRKGEEA GDGTHNHH
101: RAASRKGEEA GDGTHNHH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A [Source:UniProtKB/Swiss-Prot;Acc:O82238]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.