Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G277200.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS7A01G277200.1 | Wheat | cytosol | 100.0 | 100.0 |
| HORVU7Hr1G058490.1 | Barley | cytosol | 100.0 | 100.0 |
| EES15199 | Sorghum | cytosol | 98.84 | 98.84 |
| Zm00001d031975_P001 | Maize | mitochondrion | 97.67 | 97.67 |
| Os08t0556600-01 | Rice | plastid | 89.53 | 85.56 |
| VIT_05s0077g02340.t01 | Wine grape | cytosol | 80.23 | 79.31 |
| CDX76662 | Canola | cytosol | 75.58 | 78.31 |
| CDY11448 | Canola | cytosol | 75.58 | 78.31 |
| Bra007701.1-P | Field mustard | cytosol | 75.58 | 78.31 |
| KRH68191 | Soybean | cytosol | 74.42 | 78.05 |
| AT3G62790.1 | Thale cress | cytosol | 74.42 | 77.11 |
| KRG96447 | Soybean | cytosol | 73.26 | 76.83 |
| GSMUA_Achr11P... | Banana | cytosol | 74.42 | 76.19 |
| CDY53012 | Canola | cytosol | 73.26 | 75.9 |
| CDX80126 | Canola | cytosol | 73.26 | 75.9 |
| Solyc11g005880.1.1 | Tomato | cytosol | 73.26 | 75.0 |
| PGSC0003DMT400073819 | Potato | cytosol | 73.26 | 74.12 |
| CDY25118 | Canola | cytosol | 68.6 | 68.6 |
| CDX67904 | Canola | cytosol | 67.44 | 68.24 |
| Bra004437.1-P | Field mustard | cytosol | 74.42 | 58.18 |
| AT2G47690.1 | Thale cress | cytosol | 74.42 | 54.24 |
| Bra003510.1-P | Field mustard | cytosol | 65.12 | 42.11 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G174900.1 | EnsemblPlantsGene:TraesCS7B01G174900 | InterPro:NADH_UbQ_OxRdtase_FeS-su5 | ncoils:Coil | PANTHER:PTHR15224 | PFAM:PF10200 |
| SEG:seg | MapMan:2.4.1.4.4 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:246002079..246003351
Molecular Weight (calculated)
9973.7 Da
IEP (calculated)
8.499
GRAVY (calculated)
-0.936
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MASGWGINGN KGRCYDFWLD FSSCMSRCRQ PSDCGLLRED YLECLHHSKE FQRRNRIYKE EQRQIRAAAR KAKEEAEGAP AVAAHH
1: MASGWGITGN KGRCYDFWMD FSECMSHCRE PKDCTLLRED YLECLHHSKE FQRRNRIYKE EQRKLRAASR KGEETGDGTH THH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.