Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15199 | Sorghum | cytosol | 77.38 | 75.58 |
| HORVU7Hr1G058490.1 | Barley | cytosol | 76.19 | 74.42 |
| TraesCS7A01G277200.1 | Wheat | cytosol | 76.19 | 74.42 |
| TraesCS7B01G174900.1 | Wheat | cytosol | 76.19 | 74.42 |
| TraesCS7D01G277200.1 | Wheat | cytosol | 76.19 | 74.42 |
| Zm00001d031975_P001 | Maize | mitochondrion | 76.19 | 74.42 |
| Os08t0556600-01 | Rice | plastid | 72.62 | 67.78 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 45.24 | 38.38 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P25440_001 | EnsemblPlants:GSMUA_Achr11T25440_001 | EnsemblPlantsGene:GSMUA_Achr11G25440_001 | InterPro:NADH_UbQ_OxRdtase_FeS-su5 | ncoils:Coil | PANTHER:PTHR15224 |
| PFAM:PF10200 | PFscan:PS51808 | SEG:seg | UniParc:UPI000295C4B0 | UniProt:M0RVC4 | MapMan:2.4.1.4.4 |
Description
Putative NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr11G25440_001]
Coordinates
chr11:-:24569677..24574257
Molecular Weight (calculated)
9956.6 Da
IEP (calculated)
8.222
GRAVY (calculated)
-1.133
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: MASGWGITGN KGRCYDFWID FSECMSRCRE PKDCALVRED YFECLHHAKE FRRRNRVYKE EQRQIRAAAR KAEEAEGGKE SSHH
1: MASGWGITGN KGRCYDFWMD FSECMSHCRE PKDCTLLRED YLECLHHSKE FQRRNRIYKE EQRKLRAASR KGEETGDGTH THH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.