CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031975_P001	Maize	mitochondrion	98.84	98.84
TraesCS7D01G277200.1	Wheat	cytosol	98.84	98.84
TraesCS7B01G174900.1	Wheat	cytosol	98.84	98.84
TraesCS7A01G277200.1	Wheat	cytosol	98.84	98.84
HORVU7Hr1G058490.1	Barley	cytosol	98.84	98.84
Os08t0556600-01	Rice	plastid	90.7	86.67
VIT_05s0077g02340.t01	Wine grape	cytosol	81.4	80.46
Bra007701.1-P	Field mustard	cytosol	76.74	79.52
CDX76662	Canola	cytosol	76.74	79.52
CDY11448	Canola	cytosol	76.74	79.52
KRH68191	Soybean	cytosol	75.58	79.27
AT3G62790.1	Thale cress	cytosol	75.58	78.31
KRG96447	Soybean	cytosol	74.42	78.05
GSMUA_Achr11P...	Banana	cytosol	75.58	77.38
CDY53012	Canola	cytosol	74.42	77.11
Solyc11g005880.1.1	Tomato	cytosol	74.42	76.19
CDX80126	Canola	cytosol	73.26	75.9
PGSC0003DMT400073819	Potato	cytosol	74.42	75.29
CDY25118	Canola	cytosol	69.77	69.77
CDX67904	Canola	cytosol	68.6	69.41
Bra004437.1-P	Field mustard	cytosol	74.42	58.18
AT2G47690.1	Thale cress	cytosol	75.58	55.08
Bra003510.1-P	Field mustard	cytosol	66.28	42.86

Protein Annotations

MapMan:2.4.1.4.4	EntrezGene:8057827	UniProt:C5YNA5	ncoils:Coil	EnsemblPlants:EES15199	ProteinID:EES15199
ProteinID:EES15199.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005747	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0032981
InterPro:NADH_UbQ_OxRdtase_FeS-su5	PFAM:PF10200	PANTHER:PTHR15224	EnsemblPlantsGene:SORBI_3007G172300	unigene:Sbi.17351	UniParc:UPI0001A87DE2
RefSeq:XP_002445704.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:60739471..60741408

Molecular Weight (calculated)

10015.8 Da

IEP (calculated)

8.222

GRAVY (calculated)

-0.967

Length

86 amino acids

Sequence
(BLAST)

1: MASGWGINGN KGRCYDFWLD FSECMSRCRQ PSDCGLLRED YLECLHHSKE FQRRNRIYKE EQRQIRAAAR KAKEEAEGAP AVAAHH

Best Arabidopsis Sequence Match ( AT3G62790.1 )
(BLAST)

1: MASGWGITGN KGRCYDFWMD FSECMSHCRE PKDCTLLRED YLECLHHSKE FQRRNRIYKE EQRKLRAASR KGEETGDGTH THH

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.