Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67904 | Canola | cytosol | 90.7 | 91.76 |
| CDX76662 | Canola | cytosol | 77.91 | 80.72 |
| CDY11448 | Canola | cytosol | 77.91 | 80.72 |
| CDY53012 | Canola | cytosol | 77.91 | 80.72 |
| CDX80126 | Canola | cytosol | 76.74 | 79.52 |
| AT3G62790.1 | Thale cress | cytosol | 76.74 | 79.52 |
| KRH68191 | Soybean | cytosol | 75.58 | 79.27 |
| KRG96447 | Soybean | cytosol | 73.26 | 76.83 |
| VIT_05s0077g02340.t01 | Wine grape | cytosol | 75.58 | 74.71 |
| Solyc11g005880.1.1 | Tomato | cytosol | 70.93 | 72.62 |
| PGSC0003DMT400073819 | Potato | cytosol | 70.93 | 71.76 |
| EES15199 | Sorghum | cytosol | 69.77 | 69.77 |
| HORVU7Hr1G058490.1 | Barley | cytosol | 68.6 | 68.6 |
| TraesCS7A01G277200.1 | Wheat | cytosol | 68.6 | 68.6 |
| TraesCS7B01G174900.1 | Wheat | cytosol | 68.6 | 68.6 |
| TraesCS7D01G277200.1 | Wheat | cytosol | 68.6 | 68.6 |
| Zm00001d031975_P001 | Maize | mitochondrion | 68.6 | 68.6 |
| Os08t0556600-01 | Rice | plastid | 68.6 | 65.56 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 44.19 | 38.38 |
Protein Annotations
| EnsemblPlants:CDY25118 | EnsemblPlantsGene:GSBRNA2T00028992001 | InterPro:NADH_UbQ_OxRdtase_FeS-su5 | PANTHER:PTHR15224 | PFAM:PF10200 | PFscan:PS51808 |
| ProteinID:CDY25118 | ProteinID:CDY25118.1 | UniParc:UPI0004EDAFF6 | UniProt:A0A078GKK8 | MapMan:2.4.1.4.4 | : |
Description
BnaC06g18600DBnaC06g18600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKK8]
Coordinates
chrLK032168:-:554517..555670
Molecular Weight (calculated)
9978.6 Da
IEP (calculated)
7.884
GRAVY (calculated)
-1.155
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MASGWGITGN KGGCYDFWMD FSECMSHCRE PKDCSLLRED YLECLHHSKE FQRRNRIYKE EQRKIRAASR KGQDTGGDAT TNTSNH
001: MDISGHPKTR TRTIFDEVDE PVWFCCVLPI WVGEEMASGW GITGNKGRCY DFWMDFSECM SHCREPKDCT LLREDYLECL HHSKEFQRRN RIYKEEQRKL
101: RAASRKGEEA GDGTHNHH
101: RAASRKGEEA GDGTHNHH
Arabidopsis Description
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A [Source:UniProtKB/Swiss-Prot;Acc:O82238]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.