Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 4
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY37756 | Canola | mitochondrion | 98.55 | 63.55 |
CDX71590 | Canola | mitochondrion | 96.38 | 62.15 |
AT5G50100.1 | Thale cress | mitochondrion, plastid | 85.51 | 55.14 |
HORVU2Hr1G118360.1 | Barley | mitochondrion | 65.94 | 48.66 |
VIT_17s0000g07800.t01 | Wine grape | plastid | 75.36 | 48.37 |
GSMUA_Achr1P18320_001 | Banana | mitochondrion | 71.74 | 47.83 |
KRH63476 | Soybean | plastid | 74.64 | 47.03 |
Solyc03g113990.2.1 | Tomato | mitochondrion | 73.19 | 46.98 |
KRH54440 | Soybean | plastid | 76.09 | 46.26 |
Os04t0668800-01 | Rice | mitochondrion | 68.84 | 45.45 |
PGSC0003DMT400063214 | Potato | plastid | 71.74 | 45.41 |
Zm00001d026560_P001 | Maize | mitochondrion | 67.39 | 44.5 |
TraesCS2A01G540200.1 | Wheat | mitochondrion | 65.94 | 42.52 |
TraesCS2B01G570600.1 | Wheat | mitochondrion | 65.94 | 42.52 |
TraesCS2D01G541900.1 | Wheat | mitochondrion | 65.94 | 42.52 |
OQU82538 | Sorghum | mitochondrion | 68.12 | 40.87 |
Zm00001d001910_P002 | Maize | mitochondrion | 48.55 | 32.37 |
Protein Annotations
EnsemblPlants:Bra037942.1 | EnsemblPlants:Bra037942.1-P | EnsemblPlantsGene:Bra037942 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006950 | GO:GO:0008150 |
GO:GO:0015035 | GO:GO:0040007 | GO:GO:0042246 | InterPro:DUF393 | InterPro:Thioredoxin-like_sf | PANTHER:PTHR34290 |
PFAM:PF04134 | SUPFAM:SSF52833 | UniParc:UPI00025449E3 | UniProt:M4FA28 | MapMan:35.1 | : |
Description
AT5G50100 (E=1e-067) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336), Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); Has 598 Blast hits to 598 proteins in 152 species: Archae - 0; Bacteria - 266; Metazoa - 3; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink).
Coordinates
chrA10:-:274758..275730
Molecular Weight (calculated)
15607.7 Da
IEP (calculated)
4.985
GRAVY (calculated)
-0.391
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MLYDGDCPLC MREVDMLKER NEEYGTIKFV DISSNDYSPQ ENQGLNYETV MGQIHAIQSD GNVVTGVEAF RKLYELVGLG WVYSITKFEP IGKVADAVYD
101: IWAKYRLQVT GRPPIEAILE ARKKNKVETC GNSKACKT
101: IWAKYRLQVT GRPPIEAILE ARKKNKVETC GNSKACKT
001: MATRGAVAAA ASTIWKHRRN PSLRSLSRHF NPNFNHRIIP TGFKYQVRAI QGTSTDPVIT PLKNREEPKP QNWKIKMLYD GDCPLCMREV NMLMERNEKH
101: GTIKFVDISS NDYSPEDNQG LDYKTVMGQI HAIQSDGNVV KGVEAFRRLY EEVGLGWVYT ITKFEPIGKL ADVVYDVWAK YRLQVTGRPS IEAILEARKK
201: DKVETCGESK NCKI
101: GTIKFVDISS NDYSPEDNQG LDYKTVMGQI HAIQSDGNVV KGVEAFRRLY EEVGLGWVYT ITKFEPIGKL ADVVYDVWAK YRLQVTGRPS IEAILEARKK
201: DKVETCGESK NCKI
Arabidopsis Description
Uncharacterized protein At5g50100, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W485]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.