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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 4
  • plastid 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY37756 Canola mitochondrion 98.55 63.55
CDX71590 Canola mitochondrion 96.38 62.15
AT5G50100.1 Thale cress mitochondrion, plastid 85.51 55.14
HORVU2Hr1G118360.1 Barley mitochondrion 65.94 48.66
VIT_17s0000g07800.t01 Wine grape plastid 75.36 48.37
GSMUA_Achr1P18320_001 Banana mitochondrion 71.74 47.83
KRH63476 Soybean plastid 74.64 47.03
Solyc03g113990.2.1 Tomato mitochondrion 73.19 46.98
KRH54440 Soybean plastid 76.09 46.26
Os04t0668800-01 Rice mitochondrion 68.84 45.45
PGSC0003DMT400063214 Potato plastid 71.74 45.41
Zm00001d026560_P001 Maize mitochondrion 67.39 44.5
TraesCS2A01G540200.1 Wheat mitochondrion 65.94 42.52
TraesCS2B01G570600.1 Wheat mitochondrion 65.94 42.52
TraesCS2D01G541900.1 Wheat mitochondrion 65.94 42.52
OQU82538 Sorghum mitochondrion 68.12 40.87
Zm00001d001910_P002 Maize mitochondrion 48.55 32.37
Protein Annotations
EnsemblPlants:Bra037942.1EnsemblPlants:Bra037942.1-PEnsemblPlantsGene:Bra037942GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0006950GO:GO:0008150
GO:GO:0015035GO:GO:0040007GO:GO:0042246InterPro:DUF393InterPro:Thioredoxin-like_sfPANTHER:PTHR34290
PFAM:PF04134SUPFAM:SSF52833UniParc:UPI00025449E3UniProt:M4FA28MapMan:35.1:
Description
AT5G50100 (E=1e-067) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336), Putative thiol-disulphide oxidoreductase DCC (InterPro:IPR007263); Has 598 Blast hits to 598 proteins in 152 species: Archae - 0; Bacteria - 266; Metazoa - 3; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink).
Coordinates
chrA10:-:274758..275730
Molecular Weight (calculated)
15607.7 Da
IEP (calculated)
4.985
GRAVY (calculated)
-0.391
Length
138 amino acids
Sequence
(BLAST)
001: MLYDGDCPLC MREVDMLKER NEEYGTIKFV DISSNDYSPQ ENQGLNYETV MGQIHAIQSD GNVVTGVEAF RKLYELVGLG WVYSITKFEP IGKVADAVYD
101: IWAKYRLQVT GRPPIEAILE ARKKNKVETC GNSKACKT
Best Arabidopsis Sequence Match ( AT5G50100.1 )
(BLAST)
001: MATRGAVAAA ASTIWKHRRN PSLRSLSRHF NPNFNHRIIP TGFKYQVRAI QGTSTDPVIT PLKNREEPKP QNWKIKMLYD GDCPLCMREV NMLMERNEKH
101: GTIKFVDISS NDYSPEDNQG LDYKTVMGQI HAIQSDGNVV KGVEAFRRLY EEVGLGWVYT ITKFEPIGKL ADVVYDVWAK YRLQVTGRPS IEAILEARKK
201: DKVETCGESK NCKI
Arabidopsis Description
Uncharacterized protein At5g50100, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W485]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.