Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- peroxisome 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037942.1-P | Field mustard | cytosol | 48.37 | 75.36 |
| Solyc03g113990.2.1 | Tomato | mitochondrion | 63.72 | 63.72 |
| HORVU2Hr1G118360.1 | Barley | mitochondrion | 55.35 | 63.64 |
| PGSC0003DMT400063214 | Potato | plastid | 63.26 | 62.39 |
| KRH63476 | Soybean | plastid | 63.26 | 62.1 |
| KRH54440 | Soybean | plastid | 65.12 | 61.67 |
| CDX71590 | Canola | mitochondrion | 60.0 | 60.28 |
| GSMUA_Achr1P18320_001 | Banana | mitochondrion | 57.67 | 59.9 |
| CDY37756 | Canola | mitochondrion | 59.53 | 59.81 |
| AT5G50100.1 | Thale cress | mitochondrion, plastid | 59.53 | 59.81 |
| TraesCS2D01G541900.1 | Wheat | mitochondrion | 57.67 | 57.94 |
| TraesCS2B01G570600.1 | Wheat | mitochondrion | 57.21 | 57.48 |
| Os04t0668800-01 | Rice | mitochondrion | 55.81 | 57.42 |
| TraesCS2A01G540200.1 | Wheat | mitochondrion | 56.74 | 57.01 |
| Zm00001d026560_P001 | Maize | mitochondrion | 54.88 | 56.46 |
| OQU82538 | Sorghum | mitochondrion | 56.28 | 52.61 |
| Zm00001d001910_P002 | Maize | mitochondrion | 40.93 | 42.51 |
Protein Annotations
| EntrezGene:100250132 | wikigene:100250132 | MapMan:35.1 | ProteinID:CBI15080 | ProteinID:CBI15080.3 | UniProt:D7SHX0 |
| InterPro:DUF393 | EMBL:FN594950 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0015035 | GO:GO:0040007 | GO:GO:0042246 | GO:GO:0055114 | EntrezGene:LOC100250132 | wikigene:LOC100250132 |
| PFAM:PF04134 | PANTHER:PTHR34290 | SUPFAM:SSF52833 | TIGR:TC54956 | InterPro:Thioredoxin-like_sf | UniParc:UPI0001985114 |
| ArrayExpress:VIT_17s0000g07800 | EnsemblPlantsGene:VIT_17s0000g07800 | EnsemblPlants:VIT_17s0000g07800.t01 | unigene:Vvi.10797 | RefSeq:XP_002283569 | RefSeq:XP_002283569.1 |
Description
No Description!
Coordinates
chr17:-:8770935..8775610
Molecular Weight (calculated)
24157.1 Da
IEP (calculated)
9.243
GRAVY (calculated)
-0.388
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRLTTAAS VCIGKHGSPS LRTRFHGSAS NPLHKFISYP TVAGLRYPIR AIHGATAEAV APKKAGEEKS YQDWKIKMLY DGECPLCMRE VNMLRERNKQ
101: YGAIKFVDIS SDDYSPEENQ GLDYKTVMGR IHAIQSDGTV VTDVEAFRRL YEEVGLGWVY AITKYKPIAT IADAVYGVWA KYRLQITGRP PLEEVLELRK
201: KNKVEVCSDS KTCKM
101: YGAIKFVDIS SDDYSPEENQ GLDYKTVMGR IHAIQSDGTV VTDVEAFRRL YEEVGLGWVY AITKYKPIAT IADAVYGVWA KYRLQITGRP PLEEVLELRK
201: KNKVEVCSDS KTCKM
001: MATRGAVAAA ASTIWKHRRN PSLRSLSRHF NPNFNHRIIP TGFKYQVRAI QGTSTDPVIT PLKNREEPKP QNWKIKMLYD GDCPLCMREV NMLMERNEKH
101: GTIKFVDISS NDYSPEDNQG LDYKTVMGQI HAIQSDGNVV KGVEAFRRLY EEVGLGWVYT ITKFEPIGKL ADVVYDVWAK YRLQVTGRPS IEAILEARKK
201: DKVETCGESK NCKI
101: GTIKFVDISS NDYSPEDNQG LDYKTVMGQI HAIQSDGNVV KGVEAFRRLY EEVGLGWVYT ITKFEPIGKL ADVVYDVWAK YRLQVTGRPS IEAILEARKK
201: DKVETCGESK NCKI
Arabidopsis Description
Uncharacterized protein At5g50100, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W485]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.