CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037942.1-P	Field mustard	cytosol	63.55	98.55
CDX71590	Canola	mitochondrion	97.2	97.2
AT5G50100.1	Thale cress	mitochondrion, plastid	76.64	76.64
VIT_17s0000g07800.t01	Wine grape	plastid	59.81	59.53
KRH63476	Soybean	plastid	58.41	57.08
KRH54440	Soybean	plastid	59.81	56.39
Solyc03g113990.2.1	Tomato	mitochondrion	56.54	56.28
PGSC0003DMT400063214	Potato	plastid	56.54	55.5
GSMUA_Achr1P18320_001	Banana	mitochondrion	51.4	53.14
HORVU2Hr1G118360.1	Barley	mitochondrion	46.26	52.94
Zm00001d026560_P001	Maize	mitochondrion	50.47	51.67
Os04t0668800-01	Rice	mitochondrion	50.47	51.67
TraesCS2A01G540200.1	Wheat	mitochondrion	48.6	48.6
TraesCS2B01G570600.1	Wheat	mitochondrion	48.6	48.6
TraesCS2D01G541900.1	Wheat	mitochondrion	48.6	48.6
OQU82538	Sorghum	mitochondrion	51.4	47.83
Zm00001d001910_P002	Maize	mitochondrion	36.92	38.16

Protein Annotations

EnsemblPlants:CDY37756	EnsemblPlantsGene:GSBRNA2T00064674001	InterPro:DUF393	InterPro:Thioredoxin-like_sf	PANTHER:PTHR34290	PFAM:PF04134
ProteinID:CDY37756	ProteinID:CDY37756.1	SUPFAM:SSF52833	UniParc:UPI0004EF103D	UniProt:A0A078HJA2	MapMan:35.1

Description

BnaA10g05650DBnaA10g05650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJA2]

Coordinates

chrLK032407:-:135916..137429

Molecular Weight (calculated)

24386.2 Da

IEP (calculated)

8.888

GRAVY (calculated)

-0.592

Length

214 amino acids

Sequence
(BLAST)

001: MATRGAAAAF VIWKHRNNPS LRSISSHHFY PIFKPQMIPK GCRYQIRAIQ GESVDRGTQS KNNDEPKPKP ENWKIKMLYD GDCPLCMREV DMLKERNEEY
101: GTIKFVDISS NDYSPQENQG LNYETVMGQI HAIQSDGNVV TGVEAFRKLY ELVGLGWVYS ITKFEPIGKV ADAVYDFWAK YRLQVTGRPP IEAILEARKK
201: NKVETCGDSK ACKT

Best Arabidopsis Sequence Match ( AT5G50100.1 )
(BLAST)

001: MATRGAVAAA ASTIWKHRRN PSLRSLSRHF NPNFNHRIIP TGFKYQVRAI QGTSTDPVIT PLKNREEPKP QNWKIKMLYD GDCPLCMREV NMLMERNEKH
101: GTIKFVDISS NDYSPEDNQG LDYKTVMGQI HAIQSDGNVV KGVEAFRRLY EEVGLGWVYT ITKFEPIGKL ADVVYDVWAK YRLQVTGRPS IEAILEARKK
201: DKVETCGESK NCKI

Arabidopsis Description

Uncharacterized protein At5g50100, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W485]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.