Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G541900.1 | Wheat | mitochondrion | 96.26 | 84.11 |
| TraesCS2B01G570600.1 | Wheat | mitochondrion | 95.19 | 83.18 |
| TraesCS2A01G540200.1 | Wheat | mitochondrion | 93.05 | 81.31 |
| Os04t0668800-01 | Rice | mitochondrion | 77.01 | 68.9 |
| Zm00001d026560_P001 | Maize | mitochondrion | 75.4 | 67.46 |
| Bra037942.1-P | Field mustard | cytosol | 48.66 | 65.94 |
| OQU82538 | Sorghum | mitochondrion | 79.68 | 64.78 |
| GSMUA_Achr1P18320_001 | Banana | mitochondrion | 62.03 | 56.04 |
| Solyc03g113990.2.1 | Tomato | mitochondrion | 63.64 | 55.35 |
| VIT_17s0000g07800.t01 | Wine grape | plastid | 63.64 | 55.35 |
| PGSC0003DMT400063214 | Potato | plastid | 62.57 | 53.67 |
| KRH63476 | Soybean | plastid | 62.03 | 52.97 |
| KRH54440 | Soybean | plastid | 62.03 | 51.1 |
| CDY37756 | Canola | mitochondrion | 52.94 | 46.26 |
| AT5G50100.1 | Thale cress | mitochondrion, plastid | 52.94 | 46.26 |
| Zm00001d001910_P002 | Maize | mitochondrion | 50.8 | 45.89 |
| CDX71590 | Canola | mitochondrion | 52.41 | 45.79 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G118360.1 | EnsemblPlantsGene:HORVU2Hr1G118360 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0015035 | GO:GO:0040007 | GO:GO:0042246 | GO:GO:0055114 | InterPro:DUF393 | PANTHER:PTHR34290 |
| PFAM:PF04134 | UniParc:UPI000B462F0A | UniProt:A0A287JLT9 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr2H:-:742253431..742256973
Molecular Weight (calculated)
20944.0 Da
IEP (calculated)
8.449
GRAVY (calculated)
-0.535
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: RIPPRGARWD PAGPRPAPLY ARRCQAHSDV KAPPASEAKD AGSSAQGWRI KMLYDGECPL CMREVNMLRE RNKSYGAINF VDISSKDYSP KDNHGLDYET
101: AMGRIHAILS DGTIVTDVEA FRRLYEEVGL GWVYAVTKYE PVATIANAVY GVWAKYRMEV TGRPPLEEIF AARRQAGECK DDKACKM
101: AMGRIHAILS DGTIVTDVEA FRRLYEEVGL GWVYAVTKYE PVATIANAVY GVWAKYRMEV TGRPPLEEIF AARRQAGECK DDKACKM
001: MATRGAVAAA ASTIWKHRRN PSLRSLSRHF NPNFNHRIIP TGFKYQVRAI QGTSTDPVIT PLKNREEPKP QNWKIKMLYD GDCPLCMREV NMLMERNEKH
101: GTIKFVDISS NDYSPEDNQG LDYKTVMGQI HAIQSDGNVV KGVEAFRRLY EEVGLGWVYT ITKFEPIGKL ADVVYDVWAK YRLQVTGRPS IEAILEARKK
201: DKVETCGESK NCKI
101: GTIKFVDISS NDYSPEDNQG LDYKTVMGQI HAIQSDGNVV KGVEAFRRLY EEVGLGWVYT ITKFEPIGKL ADVVYDVWAK YRLQVTGRPS IEAILEARKK
201: DKVETCGESK NCKI
Arabidopsis Description
Uncharacterized protein At5g50100, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W485]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.