CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026560_P001	Maize	mitochondrion	83.91	92.34
Os04t0668800-01	Rice	mitochondrion	74.78	82.3
HORVU2Hr1G118360.1	Barley	mitochondrion	64.78	79.68
TraesCS2A01G540200.1	Wheat	mitochondrion	73.91	79.44
TraesCS2D01G541900.1	Wheat	mitochondrion	73.91	79.44
TraesCS2B01G570600.1	Wheat	mitochondrion	73.04	78.5
Bra037942.1-P	Field mustard	cytosol	40.87	68.12
GSMUA_Achr1P18320_001	Banana	mitochondrion	55.22	61.35
Zm00001d001910_P002	Maize	mitochondrion	55.22	61.35
Solyc03g113990.2.1	Tomato	mitochondrion	53.48	57.21
VIT_17s0000g07800.t01	Wine grape	plastid	52.61	56.28
KRH63476	Soybean	plastid	53.04	55.71
PGSC0003DMT400063214	Potato	plastid	52.17	55.05
KRH54440	Soybean	plastid	52.61	53.3
CDY37756	Canola	mitochondrion	47.83	51.4
CDX71590	Canola	mitochondrion	47.39	50.93
AT5G50100.1	Thale cress	mitochondrion, plastid	46.09	49.53

Protein Annotations

MapMan:35.1	EntrezGene:8082574	UniProt:A0A1Z5RFM3	InterPro:DUF393	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0015035	GO:GO:0040007	GO:GO:0042246	GO:GO:0055114
EnsemblPlants:OQU82538	ProteinID:OQU82538	ProteinID:OQU82538.1	PFAM:PF04134	EnsemblPlantsGene:SORBI_3006G258600	unigene:Sbi.18653
UniParc:UPI000B8B9B4D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:59461747..59466525

Molecular Weight (calculated)

25456.8 Da

IEP (calculated)

8.921

GRAVY (calculated)

-0.251

Length

230 amino acids

Sequence
(BLAST)

001: MASSLARLGA ALPRARPCAT ARALPPGRWD AAALGASRRA ALNACRCQVH SDVKVAPASD LKDGSKSETW RIKMLYDGDC PLCMREVCST RILQKLFAYT
101: APLCMREVNM LRERNKSYGA IKFVDISSKD YSPDNNQGLD YETAMGRIHA ILSDGTVVTD VEAFRKLYEE VGLGWVYAVT KYEPVATMAN AVYGVWAKYR
201: MQITGRPPLE EIMASRRAAG ECKDDKVCKM

Best Arabidopsis Sequence Match ( AT5G50100.1 )
(BLAST)

001: MATRGAVAAA ASTIWKHRRN PSLRSLSRHF NPNFNHRIIP TGFKYQVRAI QGTSTDPVIT PLKNREEPKP QNWKIKMLYD GDCPLCMREV NMLMERNEKH
101: GTIKFVDISS NDYSPEDNQG LDYKTVMGQI HAIQSDGNVV KGVEAFRRLY EEVGLGWVYT ITKFEPIGKL ADVVYDVWAK YRLQVTGRPS IEAILEARKK
201: DKVETCGESK NCKI

Arabidopsis Description

Uncharacterized protein At5g50100, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W485]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.