Factsheet for Bra005998.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 4
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009347.1-P	Field mustard	cytosol	99.26	99.26
CDX81109	Canola	cytosol	28.75	98.32
CDY60236	Canola	cytosol	28.01	98.28
GSMUA_Achr1P23310_001	Banana	cytosol	83.78	93.94
GSMUA_Achr1P12780_001	Banana	cytosol	25.55	84.55
AT5G08530.1	Thale cress	mitochondrion	99.02	82.92
VIT_19s0027g00780.t01	Wine grape	mitochondrion	93.86	80.42
Solyc02g087240.2.1	Tomato	endoplasmic reticulum, nucleus	95.58	79.88
PGSC0003DMT400003262	Potato	extracellular, mitochondrion	95.58	79.88
KRH31690	Soybean	mitochondrion	93.86	79.25
KRH69090	Soybean	endoplasmic reticulum, mitochondrion, nucleus	93.61	79.05
KXG36814	Sorghum	mitochondrion	95.58	77.96
Os07t0645400-01	Rice	mitochondrion	95.82	77.38
Zm00001d022341_P001	Maize	mitochondrion, plasma membrane	95.58	77.18
Zm00001d007048_P001	Maize	plasma membrane	94.84	76.59
TraesCS2A01G234200.2	Wheat	mitochondrion	94.59	76.24
TraesCS2B01G259100.2	Wheat	golgi	94.59	76.24
TraesCS2D01G237400.2	Wheat	mitochondrion	94.59	76.24
GSMUA_Achr1P12760_001	Banana	mitochondrion	89.68	74.34
GSMUA_AchrUn_...	Banana	plastid	65.11	71.05
HORVU2Hr1G051740.1	Barley	cytosol, peroxisome, plastid	94.59	67.43
VIT_12s0121g00370.t01	Wine grape	cytosol	2.7	12.79

Protein Annotations

Gene3D:1.20.1440.230	MapMan:2.4.1.1.1	Gene3D:3.10.20.600	Gene3D:3.40.50.11540	EnsemblPlantsGene:Bra005998	EnsemblPlants:Bra005998.1
EnsemblPlants:Bra005998.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003954	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181	GO:GO:0016020	GO:GO:0016491
GO:GO:0016651	GO:GO:0046872	GO:GO:0051287	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114
GO:GO:0070469	InterPro:IPR037207	InterPro:IPR037225	UniProt:M4CP60	InterPro:NADH-UbQ_OxRdtase_51kDa_CS	InterPro:NADH-UbQ_OxRdtase_suF
InterPro:Nuo51_FMN-bd	InterPro:Nuo51_FMN-bd_sf	InterPro:Nuop51_4Fe4S-bd	InterPro:Nuop51_4Fe4S-bd_sf	PFAM:PF01512	PFAM:PF10531
PFAM:PF10589	ScanProsite:PS00644	ScanProsite:PS00645	PANTHER:PTHR11780	PANTHER:PTHR11780:SF10	SMART:SM00928
SUPFAM:SSF140490	SUPFAM:SSF142019	SUPFAM:SSF142984	InterPro:Soluble_ligand-bd	TIGRFAMs:TIGR01959	UniParc:UPI000253F7AF
SEG:seg	:	:	:	:	:

Description

AT5G08530 (E=1e-232) CI51 | CI51 (51 kDa subunit of complex I); 4 iron, 4 sulfur cluster binding / FMN binding / NAD or NADH binding / NADH dehydrogenase (ubiquinone)/ oxidoreductase, acting on NADH or NADPH

Coordinates

chrA03:-:1543466..1544689

Molecular Weight (calculated)

44883.2 Da

IEP (calculated)

7.810

GRAVY (calculated)

-0.258

Length

407 amino acids

Sequence
(BLAST)

001: MKRGDWYRTK DLVLKGTDWI VNEMKKSGLR GRGGAGFPSG LKWSFMPKVS DGRPSYLVVN ADESEPGTCK DREIMRHDPH KLLEGCLIAG VGMRASAAYI
101: YIRGEYVNER LNLEKARREA YAAGLLGKNA CGSGYDFDVY IHFGAGAYIC GEETALLESL EGKQGKPRLK PPFPANAGLY GCPTTVTNVE TVAVSPTILR
201: RGPEWFSSFG RKNNAGTKLF CISGHVNKPC TVEEEMSIPL KELIERHCGG VRGGWDNLLA IIPGGSSVPL IPKNICEDVL MDFDALKAVQ SGLGTAAVIV
301: MDKSTDVVDA IARLSYFYKH ESCGQCTPCR EGTGWLWMIM ERMKVGNAKL EEIDMLHEVT KQIEGHTICA LGDAAAWPVQ GLIRHFRPEL ERRIRERAER
401: ELLQAAA

Best Arabidopsis Sequence Match ( AT5G08530.1 )
(BLAST)

001: MAPVRGILGL QRAVSIWKES NRLTPALRSF STQAASTSTT PQPPPPPPPP EKTHFGGLKD EDRIFTNLYG LHDPFLKGAM KRGDWHRTKD LVLKGTDWIV
101: NEMKKSGLRG RGGAGFPSGL KWSFMPKVSD GRPSYLVVNA DESEPGTCKD REIMRHDPHK LLEGCLIAGV GMRASAAYIY IRGEYVNERL NLEKARREAY
201: AAGLLGKNAC GSGYDFEVYI HFGAGAYICG EETALLESLE GKQGKPRLKP PFPANAGLYG CPTTVTNVET VAVSPTILRR GPEWFSSFGR KNNAGTKLFC
301: ISGHVNKPCT VEEEMSIPLK ELIERHCGGV RGGWDNLLAI IPGGSSVPLI PKNICEDVLM DFDALKAVQS GLGTAAVIVM DKSTDVVDAI ARLSYFYKHE
401: SCGQCTPCRE GTGWLWMIME RMKVGNAKLE EIDMLQEVTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE RRIRERAERE LLQAAA

Arabidopsis Description

CI51NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UJ45]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.