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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 6
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009347.1-P Field mustard cytosol 83.13 99.26
CDX81109 Canola cytosol 24.28 99.16
CDX69943 Canola cytosol 23.66 99.14
CDY21546 Canola cytosol 23.66 99.14
CDY60236 Canola cytosol 23.66 99.14
Bra005998.1-P Field mustard cytosol 82.92 99.02
GSMUA_Achr1P23310_001 Banana cytosol 70.16 93.94
Solyc02g087240.2.1 Tomato endoplasmic reticulum, nucleus 91.56 91.38
PGSC0003DMT400003262 Potato extracellular, mitochondrion 91.56 91.38
KRH31690 Soybean mitochondrion 90.33 91.08
KRH69090 Soybean endoplasmic reticulum, mitochondrion, nucleus 90.12 90.87
VIT_19s0027g00780.t01 Wine grape mitochondrion 88.27 90.32
KXG36814 Sorghum mitochondrion 90.95 88.58
Os07t0645400-01 Rice mitochondrion 90.95 87.7
Zm00001d022341_P001 Maize mitochondrion, plasma membrane 90.53 87.3
Zm00001d007048_P001 Maize plasma membrane 90.33 87.1
TraesCS2A01G234200.2 Wheat mitochondrion 89.92 86.53
TraesCS2B01G259100.2 Wheat golgi 89.92 86.53
TraesCS2D01G237400.2 Wheat mitochondrion 89.92 86.53
GSMUA_Achr1P12780_001 Banana cytosol 21.6 85.37
GSMUA_AchrUn_... Banana plastid 65.23 84.99
GSMUA_Achr1P12760_001 Banana mitochondrion 85.6 84.73
HORVU2Hr1G051740.1 Barley cytosol, peroxisome, plastid 90.33 76.88
VIT_12s0121g00370.t01 Wine grape cytosol 7.0 39.53
Protein Annotations
Gene3D:1.20.1440.230MapMan:2.4.1.1.1Gene3D:3.10.20.600Gene3D:3.40.50.11540EntrezGene:830752UniProt:A0A178UJ45
ProteinID:AED91315.1ArrayExpress:AT5G08530EnsemblPlantsGene:AT5G08530RefSeq:AT5G08530TAIR:AT5G08530RefSeq:AT5G08530-TAIR-G
EnsemblPlants:AT5G08530.1TAIR:AT5G08530.1EMBL:AY087737EMBL:AY092971Unigene:At.8763ProteinID:BAB10002.1
EMBL:BT006620Symbol:CI51ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0003954GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005739GO:GO:0005743GO:GO:0005747GO:GO:0008137GO:GO:0008150GO:GO:0008152
GO:GO:0010181GO:GO:0016020GO:GO:0016491GO:GO:0016651GO:GO:0046872GO:GO:0051287
GO:GO:0051536GO:GO:0051539GO:GO:0055114GO:GO:0070469InterPro:IPR037207InterPro:IPR037225
InterPro:NADH-UbQ_OxRdtase_51kDa_CSInterPro:NADH-UbQ_OxRdtase_suFRefSeq:NP_196470.1InterPro:Nuo51_FMN-bdInterPro:Nuo51_FMN-bd_sfInterPro:Nuop51_4Fe4S-bd
InterPro:Nuop51_4Fe4S-bd_sfProteinID:OAO93615.1PFAM:PF01512PFAM:PF10531PFAM:PF10589PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001017PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001170PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025195PO:PO:0025281ScanProsite:PS00644ScanProsite:PS00645PANTHER:PTHR11780PANTHER:PTHR11780:SF10
UniProt:Q9FNN5SMART:SM00928SUPFAM:SSF140490SUPFAM:SSF142019SUPFAM:SSF142984InterPro:Soluble_ligand-bd
TIGRFAMs:TIGR01959UniParc:UPI00000AB5C6SEG:seg:::
Description
CI51NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UJ45]
Coordinates
chr5:-:2759317..2762019
Molecular Weight (calculated)
53452.5 Da
IEP (calculated)
8.245
GRAVY (calculated)
-0.303
Length
486 amino acids
Sequence
(BLAST)
001: MAPVRGILGL QRAVSIWKES NRLTPALRSF STQAASTSTT PQPPPPPPPP EKTHFGGLKD EDRIFTNLYG LHDPFLKGAM KRGDWHRTKD LVLKGTDWIV
101: NEMKKSGLRG RGGAGFPSGL KWSFMPKVSD GRPSYLVVNA DESEPGTCKD REIMRHDPHK LLEGCLIAGV GMRASAAYIY IRGEYVNERL NLEKARREAY
201: AAGLLGKNAC GSGYDFEVYI HFGAGAYICG EETALLESLE GKQGKPRLKP PFPANAGLYG CPTTVTNVET VAVSPTILRR GPEWFSSFGR KNNAGTKLFC
301: ISGHVNKPCT VEEEMSIPLK ELIERHCGGV RGGWDNLLAI IPGGSSVPLI PKNICEDVLM DFDALKAVQS GLGTAAVIVM DKSTDVVDAI ARLSYFYKHE
401: SCGQCTPCRE GTGWLWMIME RMKVGNAKLE EIDMLQEVTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE RRIRERAERE LLQAAA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.