Factsheet for GSMUA_AchrUn_randomP00270_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81109	Canola	cytosol	28.95	90.76
CDX69943	Canola	cytosol	27.61	88.79
CDY21546	Canola	cytosol	27.61	88.79
CDY60236	Canola	cytosol	27.61	88.79
CDY44779	Canola	mitochondrion	27.08	87.83
GSMUA_Achr1P12780_001	Banana	cytosol	27.88	84.55
Solyc02g087240.2.1	Tomato	endoplasmic reticulum, nucleus	87.13	66.74
PGSC0003DMT400003262	Potato	extracellular, mitochondrion	87.13	66.74
KXG36814	Sorghum	mitochondrion	87.67	65.53
AT5G08530.1	Thale cress	mitochondrion	84.99	65.23
Bra005998.1-P	Field mustard	cytosol	71.05	65.11
Bra009347.1-P	Field mustard	cytosol	71.05	65.11
Zm00001d022341_P001	Maize	mitochondrion, plasma membrane	87.94	65.08
GSMUA_Achr1P23310_001	Banana	cytosol	63.27	65.01
Zm00001d007048_P001	Maize	plasma membrane	87.4	64.68
GSMUA_Achr1P12760_001	Banana	mitochondrion	84.99	64.56
TraesCS2A01G234200.2	Wheat	mitochondrion	86.6	63.96
TraesCS2B01G259100.2	Wheat	golgi	86.6	63.96
TraesCS2D01G237400.2	Wheat	mitochondrion	86.6	63.96
Os07t0645400-01	Rice	mitochondrion	85.52	63.29
HORVU2Hr1G051740.1	Barley	cytosol, peroxisome, plastid	86.6	56.57

Protein Annotations

Gene3D:1.20.1440.230	MapMan:2.4.1.1.1	Gene3D:3.10.20.600	Gene3D:3.40.50.11540	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152
GO:GO:0010181	GO:GO:0051539	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG00270_001	EnsemblPlants:GSMUA_AchrUn_randomP00270_001	EnsemblPlants:GSMUA_AchrUn_randomT00270_001
InterPro:IPR037207	InterPro:IPR037225	UniProt:M0U539	InterPro:NADH-UbQ_OxRdtase_51kDa_CS	InterPro:Nuo51_FMN-bd	InterPro:Nuo51_FMN-bd_sf
InterPro:Nuop51_4Fe4S-bd	InterPro:Nuop51_4Fe4S-bd_sf	PFAM:PF01512	PFAM:PF10531	PFAM:PF10589	ScanProsite:PS00645
PANTHER:PTHR11780	PANTHER:PTHR11780:SF10	SMART:SM00928	SUPFAM:SSF140490	SUPFAM:SSF142019	SUPFAM:SSF142984
InterPro:Soluble_ligand-bd	UniParc:UPI000295F8CA	SEG:seg	:	:	:

Description

NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG00270_001]

Coordinates

chrchrUn_random:+:789738..796361

Molecular Weight (calculated)

40788.4 Da

IEP (calculated)

8.550

GRAVY (calculated)

-0.246

Length

373 amino acids

Sequence
(BLAST)

001: MSAIGSGSAP IKNLCLLYRT ELVHHFSGWR LSSASRSLST QAATTGNTPQ PPPPPPPPEK THFGGLKDED RIFTNLYGLH DPLLKGAMKR GDWYRTKDLV
101: IKGSDWIVNE IKKSGLRGRG GAGFPSGLKW SFMPKPPFPA NAGLYGCPTT VTNVETVAVS PTILRRGPEW FASFGRKNNS GTKLFCISGH VNKPCTVEEE
201: MSIPLKELLE RHCGGVRGGW DNLLAVIPGG SSVPLLPKHI CDDVLMDYDA LKAVQSGLGT AAVIVMDKST DVVDAIARLS YFYKHESCGQ CTPCREGTGW
301: LRMIMEKLKV GNAMLEEIDM LQEVTKQIEG HTICALGDAA AWPVQGLIRH FRPELERRIK ERAQKELLEA AAA

Best Arabidopsis Sequence Match ( AT5G08530.1 )
(BLAST)

001: MAPVRGILGL QRAVSIWKES NRLTPALRSF STQAASTSTT PQPPPPPPPP EKTHFGGLKD EDRIFTNLYG LHDPFLKGAM KRGDWHRTKD LVLKGTDWIV
101: NEMKKSGLRG RGGAGFPSGL KWSFMPKVSD GRPSYLVVNA DESEPGTCKD REIMRHDPHK LLEGCLIAGV GMRASAAYIY IRGEYVNERL NLEKARREAY
201: AAGLLGKNAC GSGYDFEVYI HFGAGAYICG EETALLESLE GKQGKPRLKP PFPANAGLYG CPTTVTNVET VAVSPTILRR GPEWFSSFGR KNNAGTKLFC
301: ISGHVNKPCT VEEEMSIPLK ELIERHCGGV RGGWDNLLAI IPGGSSVPLI PKNICEDVLM DFDALKAVQS GLGTAAVIVM DKSTDVVDAI ARLSYFYKHE
401: SCGQCTPCRE GTGWLWMIME RMKVGNAKLE EIDMLQEVTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE RRIRERAERE LLQAAA

Arabidopsis Description

CI51NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UJ45]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.