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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69943 Canola cytosol 95.8 98.28
CDY21546 Canola cytosol 95.8 98.28
CDY60236 Canola cytosol 95.8 98.28
CDY44779 Canola mitochondrion 94.12 97.39
GSMUA_Achr1P12780_001 Banana cytosol 49.58 47.97
GSMUA_AchrUn_... Banana plastid 90.76 28.95
Bra005998.1-P Field mustard cytosol 98.32 28.75
AT5G08530.1 Thale cress mitochondrion 99.16 24.28
Solyc02g087240.2.1 Tomato endoplasmic reticulum, nucleus 96.64 23.61
PGSC0003DMT400003262 Potato extracellular, mitochondrion 96.64 23.61
VIT_19s0027g00780.t01 Wine grape mitochondrion 94.12 23.58
KRH69090 Soybean endoplasmic reticulum, mitochondrion, nucleus 93.28 23.03
KRH31690 Soybean mitochondrion 93.28 23.03
KXG36814 Sorghum mitochondrion 94.96 22.65
Os07t0645400-01 Rice mitochondrion 95.8 22.62
Zm00001d007048_P001 Maize plasma membrane 93.28 22.02
Zm00001d022341_P001 Maize mitochondrion, plasma membrane 93.28 22.02
TraesCS2A01G234200.2 Wheat mitochondrion 93.28 21.98
TraesCS2B01G259100.2 Wheat golgi 93.28 21.98
TraesCS2D01G237400.2 Wheat mitochondrion 93.28 21.98
GSMUA_Achr1P23310_001 Banana cytosol 59.66 19.56
HORVU2Hr1G051740.1 Barley cytosol, peroxisome, plastid 93.28 19.44
GSMUA_Achr1P12760_001 Banana mitochondrion 78.15 18.94
VIT_12s0121g00370.t01 Wine grape cytosol 9.24 12.79
Protein Annotations
EnsemblPlants:CDX81109EnsemblPlantsGene:GSBRNA2T00134555001Gene3D:1.20.1440.230GO:A0A078CYQ5GO:GO:0003674GO:GO:0005488
GO:GO:0051539InterPro:IPR037207InterPro:IPR037225InterPro:Nuo51_FMN-bd_sfInterPro:Nuop51_4Fe4S-bdInterPro:Nuop51_4Fe4S-bd_sf
PANTHER:PTHR11780PANTHER:PTHR11780:SF10PFAM:PF10589ProteinID:CDX81109ProteinID:CDX81109.1SEG:seg
SUPFAM:SSF140490SUPFAM:SSF142019UniParc:UPI0004EF4BADMapMan:35.1::
Description
BnaC03g03630D
Coordinates
chrLK031823:-:1761996..1763715
Molecular Weight (calculated)
13591.6 Da
IEP (calculated)
10.103
GRAVY (calculated)
-0.518
Length
119 amino acids
Sequence
(BLAST)
001: MKRGDWYRTK DLVLKGTDWI VNEMKKSGLR GRGGAGFPSG LKEGTGWLWM IMERMKVGNA KLEEIDMLQE VTKQIEGHTI CALGDAAAWP VQGLIRHFRP
101: ELERRIRERA ERELLQAAA
Best Arabidopsis Sequence Match ( AT5G08530.1 )
(BLAST)
001: MAPVRGILGL QRAVSIWKES NRLTPALRSF STQAASTSTT PQPPPPPPPP EKTHFGGLKD EDRIFTNLYG LHDPFLKGAM KRGDWHRTKD LVLKGTDWIV
101: NEMKKSGLRG RGGAGFPSGL KWSFMPKVSD GRPSYLVVNA DESEPGTCKD REIMRHDPHK LLEGCLIAGV GMRASAAYIY IRGEYVNERL NLEKARREAY
201: AAGLLGKNAC GSGYDFEVYI HFGAGAYICG EETALLESLE GKQGKPRLKP PFPANAGLYG CPTTVTNVET VAVSPTILRR GPEWFSSFGR KNNAGTKLFC
301: ISGHVNKPCT VEEEMSIPLK ELIERHCGGV RGGWDNLLAI IPGGSSVPLI PKNICEDVLM DFDALKAVQS GLGTAAVIVM DKSTDVVDAI ARLSYFYKHE
401: SCGQCTPCRE GTGWLWMIME RMKVGNAKLE EIDMLQEVTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE RRIRERAERE LLQAAA
Arabidopsis Description
CI51NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UJ45]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.