Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 6
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
20408568
plasma membrane: 23508561 mitochondrion: 27297264 plasma membrane: 27341663 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36814 | Sorghum | mitochondrion | 97.22 | 98.2 |
| Zm00001d007048_P001 | Maize | plasma membrane | 97.02 | 97.02 |
| GSMUA_Achr1P23310_001 | Banana | cytosol | 68.85 | 95.59 |
| Bra005998.1-P | Field mustard | cytosol | 77.18 | 95.58 |
| Bra009347.1-P | Field mustard | cytosol | 77.18 | 95.58 |
| TraesCS2B01G259100.2 | Wheat | golgi | 95.24 | 95.05 |
| TraesCS2D01G237400.2 | Wheat | mitochondrion | 95.04 | 94.85 |
| TraesCS2A01G234200.2 | Wheat | mitochondrion | 95.04 | 94.85 |
| Os07t0645400-01 | Rice | mitochondrion | 94.05 | 94.05 |
| CDX81109 | Canola | cytosol | 22.02 | 93.28 |
| CDY21546 | Canola | cytosol | 21.43 | 93.1 |
| CDX69943 | Canola | cytosol | 21.43 | 93.1 |
| CDY60236 | Canola | cytosol | 21.43 | 93.1 |
| VIT_19s0027g00780.t01 | Wine grape | mitochondrion | 85.91 | 91.16 |
| AT5G08530.1 | Thale cress | mitochondrion | 87.3 | 90.53 |
| CDY44779 | Canola | mitochondrion | 20.63 | 90.43 |
| Solyc02g087240.2.1 | Tomato | endoplasmic reticulum, nucleus | 86.71 | 89.73 |
| KRH31690 | Soybean | mitochondrion | 85.71 | 89.63 |
| PGSC0003DMT400003262 | Potato | extracellular, mitochondrion | 86.51 | 89.53 |
| KRH69090 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 85.52 | 89.42 |
| GSMUA_AchrUn_... | Banana | plastid | 65.08 | 87.94 |
| GSMUA_Achr1P12760_001 | Banana | mitochondrion | 84.33 | 86.56 |
| HORVU2Hr1G051740.1 | Barley | cytosol, peroxisome, plastid | 95.04 | 83.89 |
| VIT_12s0121g00370.t01 | Wine grape | cytosol | 6.15 | 36.05 |
Protein Annotations
Description
NADH dehydrogenase [ubiquinone] flavoprotein 1 mitochondrial
Coordinates
chr7:+:175842148..175845738
Molecular Weight (calculated)
55270.5 Da
IEP (calculated)
8.090
GRAVY (calculated)
-0.308
Length
504 amino acids
Sequence
(BLAST)
(BLAST)
001: MALRRALLRS AEISFERKAA IEYIHSLSRA QPARSLNGAG LCPASRSLST QAATTSSTPQ PPPPPPPPEK THFGGLKDED RIFTNLYGLH DPFLKGAMKR
101: GDWYRTKDLV IKGADWIVNE MKKSGLRGRG GAGFPSGLKW SFMPKVSDGR PSYLVVNADE SEPGTCKDRE IMRHDPHKLL EGCLIAGVGM RASAAYIYIR
201: GEYVNERLNL EKARQEAYAA GLLGKNACGS GYDFDVHIHF GAGAYICGEE TALLESLEGK QGKPRLKPPF PANAGLYGCP TTVTNVETVA VSPTILRRGP
301: EWFASFGRKN NSGTKLYCIS GHVNKPCTVE EEMSIPLKEL LERHCGGVRG GWDNLLAVIP GGSSVPLLPK HICDDVLMDY DALKAVQSGL GTAAVIVMDK
401: STDVVDAIAR LSYFYKHESC GQCTPCREGT PWLWMIMERL KVGDAKLEEI DMLHEVTKQI EGHTICALGD AAAWPVQGLI RHFRPELERR IRERAERELL
501: AASA
101: GDWYRTKDLV IKGADWIVNE MKKSGLRGRG GAGFPSGLKW SFMPKVSDGR PSYLVVNADE SEPGTCKDRE IMRHDPHKLL EGCLIAGVGM RASAAYIYIR
201: GEYVNERLNL EKARQEAYAA GLLGKNACGS GYDFDVHIHF GAGAYICGEE TALLESLEGK QGKPRLKPPF PANAGLYGCP TTVTNVETVA VSPTILRRGP
301: EWFASFGRKN NSGTKLYCIS GHVNKPCTVE EEMSIPLKEL LERHCGGVRG GWDNLLAVIP GGSSVPLLPK HICDDVLMDY DALKAVQSGL GTAAVIVMDK
401: STDVVDAIAR LSYFYKHESC GQCTPCREGT PWLWMIMERL KVGDAKLEEI DMLHEVTKQI EGHTICALGD AAAWPVQGLI RHFRPELERR IRERAERELL
501: AASA
001: MAPVRGILGL QRAVSIWKES NRLTPALRSF STQAASTSTT PQPPPPPPPP EKTHFGGLKD EDRIFTNLYG LHDPFLKGAM KRGDWHRTKD LVLKGTDWIV
101: NEMKKSGLRG RGGAGFPSGL KWSFMPKVSD GRPSYLVVNA DESEPGTCKD REIMRHDPHK LLEGCLIAGV GMRASAAYIY IRGEYVNERL NLEKARREAY
201: AAGLLGKNAC GSGYDFEVYI HFGAGAYICG EETALLESLE GKQGKPRLKP PFPANAGLYG CPTTVTNVET VAVSPTILRR GPEWFSSFGR KNNAGTKLFC
301: ISGHVNKPCT VEEEMSIPLK ELIERHCGGV RGGWDNLLAI IPGGSSVPLI PKNICEDVLM DFDALKAVQS GLGTAAVIVM DKSTDVVDAI ARLSYFYKHE
401: SCGQCTPCRE GTGWLWMIME RMKVGNAKLE EIDMLQEVTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE RRIRERAERE LLQAAA
101: NEMKKSGLRG RGGAGFPSGL KWSFMPKVSD GRPSYLVVNA DESEPGTCKD REIMRHDPHK LLEGCLIAGV GMRASAAYIY IRGEYVNERL NLEKARREAY
201: AAGLLGKNAC GSGYDFEVYI HFGAGAYICG EETALLESLE GKQGKPRLKP PFPANAGLYG CPTTVTNVET VAVSPTILRR GPEWFSSFGR KNNAGTKLFC
301: ISGHVNKPCT VEEEMSIPLK ELIERHCGGV RGGWDNLLAI IPGGSSVPLI PKNICEDVLM DFDALKAVQS GLGTAAVIVM DKSTDVVDAI ARLSYFYKHE
401: SCGQCTPCRE GTGWLWMIME RMKVGNAKLE EIDMLQEVTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE RRIRERAERE LLQAAA
Arabidopsis Description
CI51NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UJ45]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.