CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 8
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022341_P001	Maize	mitochondrion, plasma membrane	98.2	97.22
Zm00001d007048_P001	Maize	plasma membrane	97.19	96.23
GSMUA_Achr1P23310_001	Banana	cytosol	69.94	96.14
Bra005998.1-P	Field mustard	cytosol	77.96	95.58
Bra009347.1-P	Field mustard	cytosol	77.96	95.58
Os07t0645400-01	Rice	mitochondrion	95.99	95.04
CDX81109	Canola	cytosol	22.65	94.96
TraesCS2D01G237400.2	Wheat	mitochondrion	95.99	94.85
TraesCS2B01G259100.2	Wheat	golgi	95.99	94.85
TraesCS2A01G234200.2	Wheat	mitochondrion	95.79	94.65
CDY21546	Canola	cytosol	21.64	93.1
CDX69943	Canola	cytosol	21.64	93.1
CDY60236	Canola	cytosol	21.64	93.1
CDY44779	Canola	mitochondrion	21.24	92.17
VIT_19s0027g00780.t01	Wine grape	mitochondrion	86.77	91.16
AT5G08530.1	Thale cress	mitochondrion	88.58	90.95
Solyc02g087240.2.1	Tomato	endoplasmic reticulum, nucleus	88.18	90.35
PGSC0003DMT400003262	Potato	extracellular, mitochondrion	87.78	89.94
KRH31690	Soybean	mitochondrion	86.77	89.83
KRH69090	Soybean	endoplasmic reticulum, mitochondrion, nucleus	86.57	89.63
GSMUA_AchrUn_...	Banana	plastid	65.53	87.67
GSMUA_Achr1P12760_001	Banana	mitochondrion	85.97	87.37
HORVU2Hr1G051740.1	Barley	cytosol, peroxisome, plastid	95.99	83.89
VIT_12s0121g00370.t01	Wine grape	cytosol	6.21	36.05

Protein Annotations

Gene3D:1.20.1440.230	MapMan:2.4.1.1.1	Gene3D:3.10.20.600	Gene3D:3.40.50.11540	UniProt:A0A1B6QFX4	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003954	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0008137	GO:GO:0008150
GO:GO:0008152	GO:GO:0010181	GO:GO:0016020	GO:GO:0016491	GO:GO:0016651	GO:GO:0046872
GO:GO:0051287	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114	GO:GO:0070469	InterPro:IPR037207
InterPro:IPR037225	EnsemblPlants:KXG36814	ProteinID:KXG36814	ProteinID:KXG36814.1	InterPro:NADH-UbQ_OxRdtase_51kDa_CS	InterPro:NADH-UbQ_OxRdtase_suF
InterPro:Nuo51_FMN-bd	InterPro:Nuo51_FMN-bd_sf	InterPro:Nuop51_4Fe4S-bd	InterPro:Nuop51_4Fe4S-bd_sf	PFAM:PF01512	PFAM:PF10531
PFAM:PF10589	ScanProsite:PS00644	ScanProsite:PS00645	PANTHER:PTHR11780	PANTHER:PTHR11780:SF10	SMART:SM00928
EnsemblPlantsGene:SORBI_3002G396700	SUPFAM:SSF140490	SUPFAM:SSF142019	SUPFAM:SSF142984	InterPro:Soluble_ligand-bd	TIGRFAMs:TIGR01959
UniParc:UPI0001C80DEF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:74861705..74865456

Molecular Weight (calculated)

54749.8 Da

IEP (calculated)

8.246

GRAVY (calculated)

-0.323

Length

499 amino acids

Sequence
(BLAST)

001: MALRRALLRS AEISPDRKAA IEYFHSLSRA QPARSLNGAG RSFSTQAATT SSTPQPPPPP PPPEKTHFGG LKDEDRIFTN LYGLHDPFLK GAMKRGDWYR
101: TKDLVIKGAD WIVNEMKKSG LRGRGGAGFP SGLKWSFMPK VSDGRPSYLV VNADESEPGT CKDREIMRHD PHKLLEGCLI AGVGMRASAA YIYIRGEYVN
201: ERLNLEKARQ EAYAAGLLGK NACGSGYDFD VHIHFGAGAY ICGEETALLE SLEGKQGKPR LKPPFPANAG LYGCPTTVTN VETVAVSPTI LRRGPEWFAS
301: FGRKNNSGTK LFCISGHVNK PCTVEEEMSI PLKELLERHC GGVRGGWDNL LAVIPGGSSV PLLPKHICDD VLMDYDALKA VTSGLGTAAV IVMDKSTDVV
401: DAIARLSYFY KHESCGQCTP CREGTPWLWM IMERLKVGNA KLEEIDMLQE VTKQIEGHTI CALGDAAAWP VQGLIRHFRP ELERRIRERA ERELLAASA

Best Arabidopsis Sequence Match ( AT5G08530.1 )
(BLAST)

001: MAPVRGILGL QRAVSIWKES NRLTPALRSF STQAASTSTT PQPPPPPPPP EKTHFGGLKD EDRIFTNLYG LHDPFLKGAM KRGDWHRTKD LVLKGTDWIV
101: NEMKKSGLRG RGGAGFPSGL KWSFMPKVSD GRPSYLVVNA DESEPGTCKD REIMRHDPHK LLEGCLIAGV GMRASAAYIY IRGEYVNERL NLEKARREAY
201: AAGLLGKNAC GSGYDFEVYI HFGAGAYICG EETALLESLE GKQGKPRLKP PFPANAGLYG CPTTVTNVET VAVSPTILRR GPEWFSSFGR KNNAGTKLFC
301: ISGHVNKPCT VEEEMSIPLK ELIERHCGGV RGGWDNLLAI IPGGSSVPLI PKNICEDVLM DFDALKAVQS GLGTAAVIVM DKSTDVVDAI ARLSYFYKHE
401: SCGQCTPCRE GTGWLWMIME RMKVGNAKLE EIDMLQEVTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE RRIRERAERE LLQAAA

Arabidopsis Description

CI51NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UJ45]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.