Factsheet for TraesCS2B01G259100.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G237400.2	Wheat	mitochondrion	99.8	99.8
TraesCS2A01G234200.2	Wheat	mitochondrion	99.8	99.8
KXG36814	Sorghum	mitochondrion	94.85	95.99
Zm00001d022341_P001	Maize	mitochondrion, plasma membrane	95.05	95.24
GSMUA_Achr1P23310_001	Banana	cytosol	68.32	95.04
Bra005998.1-P	Field mustard	cytosol	76.24	94.59
Bra009347.1-P	Field mustard	cytosol	76.24	94.59
Os07t0645400-01	Rice	mitochondrion	94.26	94.44
Zm00001d007048_P001	Maize	plasma membrane	93.66	93.85
CDX81109	Canola	cytosol	21.98	93.28
CDY60236	Canola	cytosol	20.99	91.38
CDX69943	Canola	cytosol	20.99	91.38
CDY21546	Canola	cytosol	20.99	91.38
VIT_19s0027g00780.t01	Wine grape	mitochondrion	85.54	90.95
CDY44779	Canola	mitochondrion	20.59	90.43
AT5G08530.1	Thale cress	mitochondrion	86.53	89.92
PGSC0003DMT400003262	Potato	extracellular, mitochondrion	85.94	89.12
KRH31690	Soybean	mitochondrion	84.95	89.0
Solyc02g087240.2.1	Tomato	endoplasmic reticulum, nucleus	85.74	88.91
KRH69090	Soybean	endoplasmic reticulum, mitochondrion, nucleus	84.75	88.8
HORVU2Hr1G051740.1	Barley	cytosol, peroxisome, plastid	98.42	87.04
GSMUA_AchrUn_...	Banana	plastid	63.96	86.6
GSMUA_Achr1P12760_001	Banana	mitochondrion	84.16	86.56
VIT_12s0121g00370.t01	Wine grape	cytosol	5.94	34.88

Protein Annotations

Gene3D:1.20.1440.230	MapMan:2.4.1.1.1	Gene3D:3.10.20.600	Gene3D:3.40.50.11540	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0010181
GO:GO:0016651	GO:GO:0051287	GO:GO:0051539	GO:GO:0055114	InterPro:IPR037207	InterPro:IPR037225
InterPro:NADH-UbQ_OxRdtase_51kDa_CS	InterPro:NADH-UbQ_OxRdtase_suF	InterPro:Nuo51_FMN-bd	InterPro:Nuo51_FMN-bd_sf	InterPro:Nuop51_4Fe4S-bd	InterPro:Nuop51_4Fe4S-bd_sf
PFAM:PF01512	PFAM:PF10531	PFAM:PF10589	ScanProsite:PS00644	ScanProsite:PS00645	PANTHER:PTHR11780
PANTHER:PTHR11780:SF10	SMART:SM00928	SUPFAM:SSF140490	SUPFAM:SSF142019	SUPFAM:SSF142984	InterPro:Soluble_ligand-bd
TIGRFAMs:TIGR01959	EnsemblPlantsGene:TraesCS2B01G259100	EnsemblPlants:TraesCS2B01G259100.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:+:320739126..320746024

Molecular Weight (calculated)

55285.5 Da

IEP (calculated)

7.960

GRAVY (calculated)

-0.310

Length

505 amino acids

Sequence
(BLAST)

001: MALRWALLRS AEISPGRKAA LEYLHSLSKA QPTRSISCAG LHPAGRSFST QAATTSSTPQ PPPPPPPPEK THFGDLKDED RIFTNLYGLH DPFLKGAMKR
101: GDWYRTKDLV IKGADWIVNE MKKSGLRGRG GAGFPSGLKW SFMPKVSDGR PSYLVVNADE SEPGTCKDRE IMRHDPHKLL EGCLIAGVGM RASAAYIYIR
201: GEYVNERLNL EKARQEAYAS GLLGKNACGS GYDFDVHIHF GAGAYICGEE TALLESLEGK QGKPRLKPPF PANAGLYGCP TTVTNVETVA VSPTILRRGP
301: EWFASFGRKN NSGTKLYCIS GHVNKPCTVE EEMSIPLKEL IEKHCGGVRG GWDNLLAVIP GGSSVPLLPK HICDDVLMDY DALKAVQSGL GTAAVMVMDK
401: STDVVDAIAR LSYFYKHESC GQCTPCREGT GWLWMIMERL KVGNAKLEEI DMLQEVTKQI EGHTICALGD AAAWPVQGLI RHFRPELERR IRDRADSELL
501: MAASA

Best Arabidopsis Sequence Match ( AT5G08530.1 )
(BLAST)

001: MAPVRGILGL QRAVSIWKES NRLTPALRSF STQAASTSTT PQPPPPPPPP EKTHFGGLKD EDRIFTNLYG LHDPFLKGAM KRGDWHRTKD LVLKGTDWIV
101: NEMKKSGLRG RGGAGFPSGL KWSFMPKVSD GRPSYLVVNA DESEPGTCKD REIMRHDPHK LLEGCLIAGV GMRASAAYIY IRGEYVNERL NLEKARREAY
201: AAGLLGKNAC GSGYDFEVYI HFGAGAYICG EETALLESLE GKQGKPRLKP PFPANAGLYG CPTTVTNVET VAVSPTILRR GPEWFSSFGR KNNAGTKLFC
301: ISGHVNKPCT VEEEMSIPLK ELIERHCGGV RGGWDNLLAI IPGGSSVPLI PKNICEDVLM DFDALKAVQS GLGTAAVIVM DKSTDVVDAI ARLSYFYKHE
401: SCGQCTPCRE GTGWLWMIME RMKVGNAKLE EIDMLQEVTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE RRIRERAERE LLQAAA

Arabidopsis Description

CI51NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UJ45]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.