CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69943	Canola	cytosol	100.0	100.0
CDY21546	Canola	cytosol	100.0	100.0
CDY44779	Canola	mitochondrion	96.55	97.39
CDX81109	Canola	cytosol	98.28	95.8
GSMUA_Achr1P12780_001	Banana	cytosol	50.0	47.15
Bra005998.1-P	Field mustard	cytosol	98.28	28.01
GSMUA_AchrUn_...	Banana	plastid	88.79	27.61
AT5G08530.1	Thale cress	mitochondrion	99.14	23.66
Solyc02g087240.2.1	Tomato	endoplasmic reticulum, nucleus	94.83	22.59
PGSC0003DMT400003262	Potato	extracellular, mitochondrion	94.83	22.59
VIT_19s0027g00780.t01	Wine grape	mitochondrion	92.24	22.53
KRH69090	Soybean	endoplasmic reticulum, mitochondrion, nucleus	93.1	22.41
KRH31690	Soybean	mitochondrion	93.1	22.41
Os07t0645400-01	Rice	mitochondrion	95.69	22.02
KXG36814	Sorghum	mitochondrion	93.1	21.64
Zm00001d022341_P001	Maize	mitochondrion, plasma membrane	93.1	21.43
Zm00001d007048_P001	Maize	plasma membrane	91.38	21.03
TraesCS2A01G234200.2	Wheat	mitochondrion	91.38	20.99
TraesCS2B01G259100.2	Wheat	golgi	91.38	20.99
TraesCS2D01G237400.2	Wheat	mitochondrion	91.38	20.99
GSMUA_Achr1P23310_001	Banana	cytosol	60.34	19.28
HORVU2Hr1G051740.1	Barley	cytosol, peroxisome, plastid	92.24	18.74
GSMUA_Achr1P12760_001	Banana	mitochondrion	78.45	18.53
VIT_12s0121g00370.t01	Wine grape	cytosol	8.62	11.63

Protein Annotations

Gene3D:1.20.1440.230	MapMan:35.1	GO:A0A078G848	UniProt:A0A078G848	ProteinID:CDY21546.1	EnsemblPlants:CDY60236
ProteinID:CDY60236	ProteinID:CDY60236.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0051539	EnsemblPlantsGene:GSBRNA2T00028368001
InterPro:IPR037207	InterPro:IPR037225	InterPro:Nuo51_FMN-bd_sf	InterPro:Nuop51_4Fe4S-bd	InterPro:Nuop51_4Fe4S-bd_sf	PFAM:PF10589
PANTHER:PTHR11780	PANTHER:PTHR11780:SF10	SUPFAM:SSF140490	SUPFAM:SSF142019	UniParc:UPI0004EF0F9A	SEG:seg

Description

BnaA03g55790DBnaA03g55790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G848]

Coordinates

chrLK033857:-:29061..30771

Molecular Weight (calculated)

13276.2 Da

IEP (calculated)

9.974

GRAVY (calculated)

-0.541

Length

116 amino acids

Sequence
(BLAST)

001: MKRGDWHRTK DLVLKGTDWI VNEMKKSGLR GRGGAGFPSE GTGWLWMIME RMKVGNAKLE EIDMLHEVTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE
101: RRIRERAERE LLQAAA

Best Arabidopsis Sequence Match ( AT5G08530.1 )
(BLAST)

001: MAPVRGILGL QRAVSIWKES NRLTPALRSF STQAASTSTT PQPPPPPPPP EKTHFGGLKD EDRIFTNLYG LHDPFLKGAM KRGDWHRTKD LVLKGTDWIV
101: NEMKKSGLRG RGGAGFPSGL KWSFMPKVSD GRPSYLVVNA DESEPGTCKD REIMRHDPHK LLEGCLIAGV GMRASAAYIY IRGEYVNERL NLEKARREAY
201: AAGLLGKNAC GSGYDFEVYI HFGAGAYICG EETALLESLE GKQGKPRLKP PFPANAGLYG CPTTVTNVET VAVSPTILRR GPEWFSSFGR KNNAGTKLFC
301: ISGHVNKPCT VEEEMSIPLK ELIERHCGGV RGGWDNLLAI IPGGSSVPLI PKNICEDVLM DFDALKAVQS GLGTAAVIVM DKSTDVVDAI ARLSYFYKHE
401: SCGQCTPCRE GTGWLWMIME RMKVGNAKLE EIDMLQEVTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE RRIRERAERE LLQAAA

Arabidopsis Description

CI51NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UJ45]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.