CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21546	Canola	cytosol	97.39	96.55
CDY60236	Canola	cytosol	97.39	96.55
CDX69943	Canola	cytosol	97.39	96.55
CDX81109	Canola	cytosol	97.39	94.12
GSMUA_Achr1P12780_001	Banana	cytosol	50.43	47.15
GSMUA_AchrUn_...	Banana	plastid	87.83	27.08
Solyc02g087240.2.1	Tomato	endoplasmic reticulum, nucleus	93.91	22.18
PGSC0003DMT400003262	Potato	extracellular, mitochondrion	93.91	22.18
VIT_19s0027g00780.t01	Wine grape	mitochondrion	91.3	22.11
KRH31690	Soybean	mitochondrion	92.17	21.99
KRH69090	Soybean	endoplasmic reticulum, mitochondrion, nucleus	92.17	21.99
Os07t0645400-01	Rice	mitochondrion	94.78	21.63
KXG36814	Sorghum	mitochondrion	92.17	21.24
Zm00001d007048_P001	Maize	plasma membrane	90.43	20.63
Zm00001d022341_P001	Maize	mitochondrion, plasma membrane	90.43	20.63
TraesCS2A01G234200.2	Wheat	mitochondrion	90.43	20.59
TraesCS2B01G259100.2	Wheat	golgi	90.43	20.59
TraesCS2D01G237400.2	Wheat	mitochondrion	90.43	20.59
GSMUA_Achr1P23310_001	Banana	cytosol	60.87	19.28
GSMUA_Achr1P12760_001	Banana	mitochondrion	79.13	18.53
HORVU2Hr1G051740.1	Barley	cytosol, peroxisome, plastid	91.3	18.39
VIT_12s0121g00370.t01	Wine grape	cytosol	8.7	11.63

Protein Annotations

EnsemblPlants:CDY44779	EnsemblPlantsGene:GSBRNA2T00080779001	Gene3D:1.20.1440.230	GO:A0A078I5N6	GO:GO:0003674	GO:GO:0005488
GO:GO:0051539	InterPro:IPR037207	InterPro:IPR037225	InterPro:Nuo51_FMN-bd_sf	InterPro:Nuop51_4Fe4S-bd	InterPro:Nuop51_4Fe4S-bd_sf
PANTHER:PTHR11780	PANTHER:PTHR11780:SF10	PFAM:PF10589	ProteinID:CDY44779	ProteinID:CDY44779.1	SEG:seg
SUPFAM:SSF140490	SUPFAM:SSF142019	UniParc:UPI0004EDF401	UniProt:A0A078I5N6	MapMan:35.1	:

Description

BnaC02g01080DBnaC02g01080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5N6]

Coordinates

chrLK032601:-:62371..62889

Molecular Weight (calculated)

13224.1 Da

IEP (calculated)

10.032

GRAVY (calculated)

-0.550

Length

115 amino acids

Sequence
(BLAST)

001: MKRGDWHRTK DLVLKGTDWI VNEMKRSGLR GRDGAGFPSG TGWLWMIMER MKVGNAKLEE IDMLQEVTKQ IEGHTICALG DAAAWPVQGL IRHFRPELER
101: RIRERAEREL LQAAA

Best Arabidopsis Sequence Match ( AT5G08530.1 )
(BLAST)

001: MAPVRGILGL QRAVSIWKES NRLTPALRSF STQAASTSTT PQPPPPPPPP EKTHFGGLKD EDRIFTNLYG LHDPFLKGAM KRGDWHRTKD LVLKGTDWIV
101: NEMKKSGLRG RGGAGFPSGL KWSFMPKVSD GRPSYLVVNA DESEPGTCKD REIMRHDPHK LLEGCLIAGV GMRASAAYIY IRGEYVNERL NLEKARREAY
201: AAGLLGKNAC GSGYDFEVYI HFGAGAYICG EETALLESLE GKQGKPRLKP PFPANAGLYG CPTTVTNVET VAVSPTILRR GPEWFSSFGR KNNAGTKLFC
301: ISGHVNKPCT VEEEMSIPLK ELIERHCGGV RGGWDNLLAI IPGGSSVPLI PKNICEDVLM DFDALKAVQS GLGTAAVIVM DKSTDVVDAI ARLSYFYKHE
401: SCGQCTPCRE GTGWLWMIME RMKVGNAKLE EIDMLQEVTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE RRIRERAERE LLQAAA

Arabidopsis Description

CI51NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UJ45]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.