Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 3
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81109 | Canola | cytosol | 12.79 | 9.24 |
| CDY44779 | Canola | mitochondrion | 11.63 | 8.7 |
| CDX69943 | Canola | cytosol | 11.63 | 8.62 |
| CDY21546 | Canola | cytosol | 11.63 | 8.62 |
| CDY60236 | Canola | cytosol | 11.63 | 8.62 |
| VIT_19s0027g00780.t01 | Wine grape | mitochondrion | 39.53 | 7.16 |
| AT5G08530.1 | Thale cress | mitochondrion | 39.53 | 7.0 |
| Solyc02g087240.2.1 | Tomato | endoplasmic reticulum, nucleus | 38.37 | 6.78 |
| PGSC0003DMT400003262 | Potato | extracellular, mitochondrion | 38.37 | 6.78 |
| KXG36814 | Sorghum | mitochondrion | 36.05 | 6.21 |
| Zm00001d022341_P001 | Maize | mitochondrion, plasma membrane | 36.05 | 6.15 |
| Zm00001d007048_P001 | Maize | plasma membrane | 34.88 | 5.95 |
| TraesCS2A01G234200.2 | Wheat | mitochondrion | 34.88 | 5.94 |
| TraesCS2B01G259100.2 | Wheat | golgi | 34.88 | 5.94 |
| TraesCS2D01G237400.2 | Wheat | mitochondrion | 34.88 | 5.94 |
| Os07t0645400-01 | Rice | mitochondrion | 33.72 | 5.75 |
| HORVU2Hr1G051740.1 | Barley | cytosol, peroxisome, plastid | 33.72 | 5.08 |
| Bra005998.1-P | Field mustard | cytosol | 12.79 | 2.7 |
| Bra009347.1-P | Field mustard | cytosol | 11.63 | 2.46 |
| GSMUA_Achr1P12780_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_12s0121g00370 | EMBL:FN596758 | EnsemblPlants:VIT_12s0121g00370.t01 | EnsemblPlantsGene:VIT_12s0121g00370 | InterPro:IPR037225 | InterPro:Nuo51_FMN-bd_sf |
| PANTHER:PTHR11780 | PANTHER:PTHR11780:SF10 | ProteinID:CCB62639 | ProteinID:CCB62639.1 | SUPFAM:SSF142019 | UniParc:UPI0002108EC2 |
| UniProt:F6I6S1 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:12474528..12476770
Molecular Weight (calculated)
9407.4 Da
IEP (calculated)
7.678
GRAVY (calculated)
-0.273
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MWTDKHHPHV TGDSMLGIIF GGPKDEDCIF TNIYGLHDPF LKSAMKMGGW YKTGDIVLKG SDWIVSEMKE SGLRGRGGVG LPSGIK
001: MAPVRGILGL QRAVSIWKES NRLTPALRSF STQAASTSTT PQPPPPPPPP EKTHFGGLKD EDRIFTNLYG LHDPFLKGAM KRGDWHRTKD LVLKGTDWIV
101: NEMKKSGLRG RGGAGFPSGL KWSFMPKVSD GRPSYLVVNA DESEPGTCKD REIMRHDPHK LLEGCLIAGV GMRASAAYIY IRGEYVNERL NLEKARREAY
201: AAGLLGKNAC GSGYDFEVYI HFGAGAYICG EETALLESLE GKQGKPRLKP PFPANAGLYG CPTTVTNVET VAVSPTILRR GPEWFSSFGR KNNAGTKLFC
301: ISGHVNKPCT VEEEMSIPLK ELIERHCGGV RGGWDNLLAI IPGGSSVPLI PKNICEDVLM DFDALKAVQS GLGTAAVIVM DKSTDVVDAI ARLSYFYKHE
401: SCGQCTPCRE GTGWLWMIME RMKVGNAKLE EIDMLQEVTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE RRIRERAERE LLQAAA
101: NEMKKSGLRG RGGAGFPSGL KWSFMPKVSD GRPSYLVVNA DESEPGTCKD REIMRHDPHK LLEGCLIAGV GMRASAAYIY IRGEYVNERL NLEKARREAY
201: AAGLLGKNAC GSGYDFEVYI HFGAGAYICG EETALLESLE GKQGKPRLKP PFPANAGLYG CPTTVTNVET VAVSPTILRR GPEWFSSFGR KNNAGTKLFC
301: ISGHVNKPCT VEEEMSIPLK ELIERHCGGV RGGWDNLLAI IPGGSSVPLI PKNICEDVLM DFDALKAVQS GLGTAAVIVM DKSTDVVDAI ARLSYFYKHE
401: SCGQCTPCRE GTGWLWMIME RMKVGNAKLE EIDMLQEVTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE RRIRERAERE LLQAAA
Arabidopsis Description
CI51NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178UJ45]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.