Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28737 | Canola | cytosol | 99.37 | 99.37 |
| CDY43151 | Canola | cytosol | 99.37 | 99.37 |
| Bra021373.1-P | Field mustard | cytosol | 98.11 | 98.11 |
| AT3G03100.1 | Thale cress | cytosol, mitochondrion, nucleus | 93.08 | 93.08 |
| VIT_16s0039g02180.t01 | Wine grape | mitochondrion | 79.87 | 80.38 |
| KRH27732 | Soybean | mitochondrion | 76.73 | 77.22 |
| KRH77692 | Soybean | mitochondrion | 75.47 | 76.92 |
| Solyc03g096940.2.1 | Tomato | nucleus | 75.47 | 76.43 |
| PGSC0003DMT400001528 | Potato | cytosol | 75.47 | 75.95 |
| GSMUA_Achr11P... | Banana | cytosol | 74.21 | 75.64 |
| GSMUA_Achr8P14620_001 | Banana | cytosol | 72.96 | 74.36 |
| TraesCS1A01G197300.1 | Wheat | mitochondrion | 70.44 | 70.0 |
| Os10t0579300-01 | Rice | mitochondrion | 69.81 | 69.38 |
| Zm00001d030138_P001 | Maize | cytosol | 47.8 | 66.09 |
| KXG38809 | Sorghum | cytosol, mitochondrion, nucleus | 68.55 | 63.74 |
| TraesCS1B01G211900.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 61.01 | 59.15 |
| TraesCS1D01G200800.1 | Wheat | cytosol | 61.01 | 59.15 |
| HORVU1Hr1G051280.1 | Barley | cytosol, mitochondrion, plastid | 69.18 | 54.46 |
| Zm00001d014428_P002 | Maize | mitochondrion | 55.35 | 44.22 |
Protein Annotations
| MapMan:2.4.1.4.1.6 | EnsemblPlantsGene:Bra032017 | EnsemblPlants:Bra032017.1 | EnsemblPlants:Bra032017.1-P | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 |
| GO:GO:0006091 | GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0022900 | GO:GO:0055114 | GO:GO:0070469 | UniProt:M4ET87 | InterPro:NDUFA12 |
| PFAM:PF05071 | PANTHER:PTHR12910 | PANTHER:PTHR12910:SF2 | UniParc:UPI000254615C | : | : |
Description
AT3G03100 (E=2e-089) | NADH:ubiquinone oxidoreductase family protein
Coordinates
chrA02:-:26644996..26646090
Molecular Weight (calculated)
18326.8 Da
IEP (calculated)
9.840
GRAVY (calculated)
-0.792
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTVAKSAL ETIREKGLGG FLRMIREEGF LRCLPDGNLL QTKIHNIGAT LIGVDKFGNK YYQKLGDTQC GRHRWVEYAS KDRYNASQVP AEWHGWLHFI
101: TDHTGDELLS QKPKRYGIEH RENFSGHGDA YIYHSKGHTL NPGQKNWTRY QPWVPTKTK
101: TDHTGDELLS QKPKRYGIEH RENFSGHGDA YIYHSKGHTL NPGQKNWTRY QPWVPTKTK
001: MALTVAKSAL EAIREKGLGG FMRMIREEGF MRCLPDGNLL QTKIHNIGAT LVGVDKFGNK YYQKLGDTQY GRHRWVEYAS KDRYNASQVP AEWHGWLHFI
101: TDHTGDELLS LKPKRYGLEH KENFSGEGDA YIYHSKGHTL NPGQKNWTRY QSWVPTKTQ
101: TDHTGDELLS LKPKRYGLEH KENFSGEGDA YIYHSKGHTL NPGQKNWTRY QSWVPTKTQ
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Source:UniProtKB/TrEMBL;Acc:A0A178V630]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.