Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d030138_P001 | Maize | cytosol | 58.48 | 86.96 |
| Os10t0579300-01 | Rice | mitochondrion | 81.29 | 86.88 |
| TraesCS1A01G197300.1 | Wheat | mitochondrion | 77.78 | 83.12 |
| GSMUA_Achr8P14620_001 | Banana | cytosol | 74.27 | 81.41 |
| KRH77692 | Soybean | mitochondrion | 70.18 | 76.92 |
| GSMUA_Achr11P... | Banana | cytosol | 70.18 | 76.92 |
| KRH27732 | Soybean | mitochondrion | 70.18 | 75.95 |
| Solyc03g096940.2.1 | Tomato | nucleus | 69.59 | 75.8 |
| PGSC0003DMT400001528 | Potato | cytosol | 69.01 | 74.68 |
| VIT_16s0039g02180.t01 | Wine grape | mitochondrion | 67.25 | 72.78 |
| CDY49923 | Canola | cytosol | 65.5 | 70.44 |
| CDY23465 | Canola | cytosol | 65.5 | 70.44 |
| Bra021373.1-P | Field mustard | cytosol | 65.5 | 70.44 |
| AT3G03100.1 | Thale cress | cytosol, mitochondrion, nucleus | 64.91 | 69.81 |
| CDY43151 | Canola | cytosol | 63.74 | 68.55 |
| CDY28737 | Canola | cytosol | 63.74 | 68.55 |
| Bra032017.1-P | Field mustard | cytosol | 63.74 | 68.55 |
| TraesCS1B01G211900.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 64.91 | 67.68 |
| TraesCS1D01G200800.1 | Wheat | cytosol | 64.91 | 67.68 |
| HORVU1Hr1G051280.1 | Barley | cytosol, mitochondrion, plastid | 78.95 | 66.83 |
| Zm00001d014428_P002 | Maize | mitochondrion | 76.02 | 65.33 |
Protein Annotations
| MapMan:2.4.1.4.1.6 | UniProt:A0A1B6QLK3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0005747 |
| GO:GO:0006091 | GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009719 |
| GO:GO:0009735 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0022900 | GO:GO:0050897 | GO:GO:0055114 |
| GO:GO:0070469 | EnsemblPlants:KXG38809 | ProteinID:KXG38809 | ProteinID:KXG38809.1 | InterPro:NDUFA12 | PFAM:PF05071 |
| PANTHER:PTHR12910 | PANTHER:PTHR12910:SF2 | EnsemblPlantsGene:SORBI_3001G282500 | UniParc:UPI0002207020 | : | : |
Description
hypothetical protein
Coordinates
chr1:+:55458862..55462531
Molecular Weight (calculated)
19797.4 Da
IEP (calculated)
9.020
GRAVY (calculated)
-0.874
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVVRGVLR GIKEKGLTNF IRDARDEGYL NRLCVMPDMS SCKCLLDGNL LQTKIHNIGA TLVGVDKFGN KYYEKLHDTQ YGRHRWVEYA EKGRYNASQV
101: PPEWHGWLHH VTDSTGDKLL NQKTARYLVE HKQNYSGEGE ELIYHSKGHA LNPGQRDWTR YQPWEPKKEQ A
101: PPEWHGWLHH VTDSTGDKLL NQKTARYLVE HKQNYSGEGE ELIYHSKGHA LNPGQRDWTR YQPWEPKKEQ A
001: MALTVAKSAL EAIREKGLGG FMRMIREEGF MRCLPDGNLL QTKIHNIGAT LVGVDKFGNK YYQKLGDTQY GRHRWVEYAS KDRYNASQVP AEWHGWLHFI
101: TDHTGDELLS LKPKRYGLEH KENFSGEGDA YIYHSKGHTL NPGQKNWTRY QSWVPTKTQ
101: TDHTGDELLS LKPKRYGLEH KENFSGEGDA YIYHSKGHTL NPGQKNWTRY QSWVPTKTQ
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Source:UniProtKB/TrEMBL;Acc:A0A178V630]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.