Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0579300-01 | Rice | mitochondrion | 83.75 | 83.75 |
| Zm00001d030138_P001 | Maize | cytosol | 58.12 | 80.87 |
| TraesCS1B01G211900.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 80.62 | 78.66 |
| TraesCS1D01G200800.1 | Wheat | cytosol | 80.0 | 78.05 |
| KXG38809 | Sorghum | cytosol, mitochondrion, nucleus | 83.12 | 77.78 |
| HORVU1Hr1G051280.1 | Barley | cytosol, mitochondrion, plastid | 95.62 | 75.74 |
| PGSC0003DMT400001528 | Potato | cytosol | 73.12 | 74.05 |
| GSMUA_Achr8P14620_001 | Banana | cytosol | 71.88 | 73.72 |
| VIT_16s0039g02180.t01 | Wine grape | mitochondrion | 72.5 | 73.42 |
| Solyc03g096940.2.1 | Tomato | nucleus | 71.88 | 73.25 |
| KRH77692 | Soybean | mitochondrion | 71.25 | 73.08 |
| KRH27732 | Soybean | mitochondrion | 71.88 | 72.78 |
| GSMUA_Achr11P... | Banana | cytosol | 70.62 | 72.44 |
| CDY49923 | Canola | cytosol | 71.25 | 71.7 |
| CDY23465 | Canola | cytosol | 71.25 | 71.7 |
| Bra021373.1-P | Field mustard | cytosol | 71.25 | 71.7 |
| CDY43151 | Canola | cytosol | 70.0 | 70.44 |
| CDY28737 | Canola | cytosol | 70.0 | 70.44 |
| Bra032017.1-P | Field mustard | cytosol | 70.0 | 70.44 |
| AT3G03100.1 | Thale cress | cytosol, mitochondrion, nucleus | 68.75 | 69.18 |
| Zm00001d014428_P002 | Maize | mitochondrion | 66.88 | 53.77 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G197300.1 | EnsemblPlantsGene:TraesCS1A01G197300 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 | GO:GO:0008137 |
| GO:GO:0008150 | GO:GO:0009055 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0016020 | GO:GO:0050897 |
| InterPro:NDUFA12 | PANTHER:PTHR12910 | PANTHER:PTHR12910:SF2 | PFAM:PF05071 | MapMan:2.4.1.4.1.6 | : |
Description
No Description!
Coordinates
chr1A:-:355336160..355338581
Molecular Weight (calculated)
18690.9 Da
IEP (calculated)
9.216
GRAVY (calculated)
-1.026
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVVRSVWQ GIREKGLTNF LRHAREEGYL KCLGDGNLLQ TKIHNIGATL VGVDTFGNKY YEKLHDTQYG RHRWVEYADK GRYNASQVPA EWHGWLHHIT
101: DSTGDKLLEE KTKKFIREHR QNYTGQGDDL IYHSKGHALN PGQRDWTRYQ PWEPKKEEAT
101: DSTGDKLLEE KTKKFIREHR QNYTGQGDDL IYHSKGHALN PGQRDWTRYQ PWEPKKEEAT
001: MALTVAKSAL EAIREKGLGG FMRMIREEGF MRCLPDGNLL QTKIHNIGAT LVGVDKFGNK YYQKLGDTQY GRHRWVEYAS KDRYNASQVP AEWHGWLHFI
101: TDHTGDELLS LKPKRYGLEH KENFSGEGDA YIYHSKGHTL NPGQKNWTRY QSWVPTKTQ
101: TDHTGDELLS LKPKRYGLEH KENFSGEGDA YIYHSKGHTL NPGQKNWTRY QSWVPTKTQ
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Source:UniProtKB/TrEMBL;Acc:A0A178V630]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.