Factsheet for HORVU1Hr1G051280.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G197300.1	Wheat	mitochondrion	75.74	95.62
Os10t0579300-01	Rice	mitochondrion	66.34	83.75
Zm00001d030138_P001	Maize	cytosol	47.03	82.61
KXG38809	Sorghum	cytosol, mitochondrion, nucleus	66.83	78.95
TraesCS1B01G211900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	62.38	76.83
TraesCS1D01G200800.1	Wheat	cytosol	61.88	76.22
GSMUA_Achr8P14620_001	Banana	cytosol	57.92	75.0
PGSC0003DMT400001528	Potato	cytosol	58.42	74.68
Solyc03g096940.2.1	Tomato	nucleus	57.43	73.89
KRH77692	Soybean	mitochondrion	56.93	73.72
KRH27732	Soybean	mitochondrion	57.43	73.42
VIT_16s0039g02180.t01	Wine grape	mitochondrion	56.44	72.15
GSMUA_Achr11P...	Banana	cytosol	55.45	71.79
CDY49923	Canola	cytosol	55.45	70.44
CDY23465	Canola	cytosol	55.45	70.44
Bra021373.1-P	Field mustard	cytosol	55.45	70.44
CDY43151	Canola	cytosol	54.46	69.18
CDY28737	Canola	cytosol	54.46	69.18
Bra032017.1-P	Field mustard	cytosol	54.46	69.18
AT3G03100.1	Thale cress	cytosol, mitochondrion, nucleus	53.47	67.92
Zm00001d014428_P002	Maize	mitochondrion	53.96	54.77

Protein Annotations

MapMan:2.4.1.4.1.6	UniProt:A0A287FJH7	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0005747
GO:GO:0006091	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009719
GO:GO:0009735	GO:GO:0009987	GO:GO:0016020	GO:GO:0022900	GO:GO:0050897	GO:GO:0055114
GO:GO:0070469	EnsemblPlantsGene:HORVU1Hr1G051280	EnsemblPlants:HORVU1Hr1G051280.1	InterPro:NDUFA12	PFAM:PF05071	PANTHER:PTHR12910
PANTHER:PTHR12910:SF2	UniParc:UPI000B46A3CC	:	:	:	:

Description

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Source:UniProtKB/TrEMBL;Acc:A0A287FJH7]

Coordinates

chrchr1H:+:380286009..380289082

Molecular Weight (calculated)

23051.0 Da

IEP (calculated)

9.544

GRAVY (calculated)

-0.868

Length

202 amino acids

Sequence
(BLAST)

001: IPSWSASPIS SYLPSERERG VASHRPLRGI RGGAAQEAKV SSMAAVVRSV WQGIKEKGLA NFLRYARDEG YLKCLGDGNL LQTKIHNIGA TLVGVDSFGN
101: KYYEKLHDTQ YGRHRWVEYA EKGRYNASQV PAEWHGWLHH ITDSTGDKLL EEKTKKFIME HRQNYTGQGD DLIYHSKGHA LNPGQRDWTR YQPWEPKKEE
201: AT

Best Arabidopsis Sequence Match ( AT3G03100.1 )
(BLAST)

001: MALTVAKSAL EAIREKGLGG FMRMIREEGF MRCLPDGNLL QTKIHNIGAT LVGVDKFGNK YYQKLGDTQY GRHRWVEYAS KDRYNASQVP AEWHGWLHFI
101: TDHTGDELLS LKPKRYGLEH KENFSGEGDA YIYHSKGHTL NPGQKNWTRY QSWVPTKTQ

Arabidopsis Description

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Source:UniProtKB/TrEMBL;Acc:A0A178V630]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.