Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P14620_001 | Banana | cytosol | 87.18 | 87.18 |
| Solyc03g096940.2.1 | Tomato | nucleus | 81.41 | 80.89 |
| PGSC0003DMT400001528 | Potato | cytosol | 80.77 | 79.75 |
| VIT_16s0039g02180.t01 | Wine grape | mitochondrion | 78.21 | 77.22 |
| KRH77692 | Soybean | mitochondrion | 76.92 | 76.92 |
| KRH27732 | Soybean | mitochondrion | 76.92 | 75.95 |
| Bra021373.1-P | Field mustard | cytosol | 76.28 | 74.84 |
| CDY49923 | Canola | cytosol | 76.28 | 74.84 |
| CDY23465 | Canola | cytosol | 76.28 | 74.84 |
| AT3G03100.1 | Thale cress | cytosol, mitochondrion, nucleus | 76.28 | 74.84 |
| Os10t0579300-01 | Rice | mitochondrion | 76.28 | 74.38 |
| CDY43151 | Canola | cytosol | 75.64 | 74.21 |
| CDY28737 | Canola | cytosol | 75.64 | 74.21 |
| Bra032017.1-P | Field mustard | cytosol | 75.64 | 74.21 |
| TraesCS1A01G197300.1 | Wheat | mitochondrion | 72.44 | 70.62 |
| Zm00001d030138_P001 | Maize | cytosol | 51.92 | 70.43 |
| KXG38809 | Sorghum | cytosol, mitochondrion, nucleus | 76.92 | 70.18 |
| TraesCS1B01G211900.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 62.82 | 59.76 |
| TraesCS1D01G200800.1 | Wheat | cytosol | 62.82 | 59.76 |
| HORVU1Hr1G051280.1 | Barley | cytosol, mitochondrion, plastid | 71.79 | 55.45 |
| Zm00001d014428_P002 | Maize | mitochondrion | 60.26 | 47.24 |
Protein Annotations
| MapMan:2.4.1.4.1.6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006091 | GO:GO:0008137 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0022900 | GO:GO:0055114 |
| GO:GO:0070469 | EnsemblPlantsGene:GSMUA_Achr11G06250_001 | EnsemblPlants:GSMUA_Achr11P06250_001 | EnsemblPlants:GSMUA_Achr11T06250_001 | UniProt:M0RPV5 | InterPro:NDUFA12 |
| PFAM:PF05071 | PANTHER:PTHR12910 | PANTHER:PTHR12910:SF2 | UniParc:UPI0002969910 | : | : |
Description
Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Source:GMGC_GENE;Acc:GSMUA_Achr11G06250_001]
Coordinates
chr11:-:4857355..4862385
Molecular Weight (calculated)
18142.5 Da
IEP (calculated)
8.850
GRAVY (calculated)
-0.761
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSVVRGVLK VINEKGVGGF IKHLREEGYM RCLLDGNLLQ TKLHNIGATL IGVDKFGNLY YEKLDVQYGR HRWVEYAEKG RYNASQVPPE WHGWLHYVTD
101: HTGDELLMLK PKRYGEEHRE NFSGEGDAYI YHSKGHALNP GQRDWTRYQP WQPAKS
101: HTGDELLMLK PKRYGEEHRE NFSGEGDAYI YHSKGHALNP GQRDWTRYQP WQPAKS
001: MALTVAKSAL EAIREKGLGG FMRMIREEGF MRCLPDGNLL QTKIHNIGAT LVGVDKFGNK YYQKLGDTQY GRHRWVEYAS KDRYNASQVP AEWHGWLHFI
101: TDHTGDELLS LKPKRYGLEH KENFSGEGDA YIYHSKGHTL NPGQKNWTRY QSWVPTKTQ
101: TDHTGDELLS LKPKRYGLEH KENFSGEGDA YIYHSKGHTL NPGQKNWTRY QSWVPTKTQ
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Source:UniProtKB/TrEMBL;Acc:A0A178V630]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.