Factsheet for Zm00001d014428_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38809	Sorghum	cytosol, mitochondrion, nucleus	65.33	76.02
Os10t0579300-01	Rice	mitochondrion	56.78	70.62
Zm00001d030138_P001	Maize	cytosol	39.2	67.83
TraesCS1A01G197300.1	Wheat	mitochondrion	53.77	66.88
GSMUA_Achr8P14620_001	Banana	cytosol	50.75	64.74
KRH77692	Soybean	mitochondrion	49.25	62.82
KRH27732	Soybean	mitochondrion	49.25	62.03
GSMUA_Achr11P...	Banana	cytosol	47.24	60.26
VIT_16s0039g02180.t01	Wine grape	mitochondrion	47.74	60.13
Solyc03g096940.2.1	Tomato	nucleus	47.24	59.87
PGSC0003DMT400001528	Potato	cytosol	47.24	59.49
CDY49923	Canola	cytosol	45.73	57.23
CDY23465	Canola	cytosol	45.73	57.23
Bra021373.1-P	Field mustard	cytosol	45.73	57.23
TraesCS1B01G211900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	46.73	56.71
TraesCS1D01G200800.1	Wheat	cytosol	46.73	56.71
AT3G03100.1	Thale cress	cytosol, mitochondrion, nucleus	45.23	56.6
CDY43151	Canola	cytosol	44.22	55.35
CDY28737	Canola	cytosol	44.22	55.35
Bra032017.1-P	Field mustard	cytosol	44.22	55.35
HORVU1Hr1G051280.1	Barley	cytosol, mitochondrion, plastid	54.77	53.96

Protein Annotations

EntrezGene:100192845	MapMan:2.4.1.4.1.6	UniProt:A0A1D6GTC2	ProteinID:AQK66246.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0006091	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0016020	GO:GO:0022900	GO:GO:0055114	GO:GO:0070469	InterPro:NDUFA12	PFAM:PF05071
PANTHER:PTHR12910	PANTHER:PTHR12910:SF2	UniParc:UPI0008459176	EnsemblPlantsGene:Zm00001d014428	EnsemblPlants:Zm00001d014428_P002	EnsemblPlants:Zm00001d014428_T002

Description

Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

Coordinates

chr5:-:46505771..46508810

Molecular Weight (calculated)

22829.1 Da

IEP (calculated)

9.610

GRAVY (calculated)

-0.601

Length

199 amino acids

Sequence
(BLAST)

001: MAAALRAVLR GIKEKGLTNF IRDVRDEGYL IVLALIAPQS LMLHNTITYA AYASVDSFYQ QMPSGREPFV SGHLTVPPFS RNGCDYVSQT VSTTIIFRQT
101: KIHNIGATLV GVDKFGNKYY EKLHDTQYGR HRWVEYAEKG RYNASQLLNQ KTARYLVEHK QNYSGEGEEL IYHSKGHALN PGQRDWTRYQ PWEPKKEQA

Best Arabidopsis Sequence Match ( AT3G03100.1 )
(BLAST)

001: MALTVAKSAL EAIREKGLGG FMRMIREEGF MRCLPDGNLL QTKIHNIGAT LVGVDKFGNK YYQKLGDTQY GRHRWVEYAS KDRYNASQVP AEWHGWLHFI
101: TDHTGDELLS LKPKRYGLEH KENFSGEGDA YIYHSKGHTL NPGQKNWTRY QSWVPTKTQ

Arabidopsis Description

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Source:UniProtKB/TrEMBL;Acc:A0A178V630]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.