Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G211900.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 98.78 | 98.78 |
| TraesCS1A01G197300.1 | Wheat | mitochondrion | 78.05 | 80.0 |
| Os10t0579300-01 | Rice | mitochondrion | 67.68 | 69.38 |
| KXG38809 | Sorghum | cytosol, mitochondrion, nucleus | 67.68 | 64.91 |
| GSMUA_Achr8P14620_001 | Banana | cytosol | 60.37 | 63.46 |
| KRH77692 | Soybean | mitochondrion | 60.37 | 63.46 |
| PGSC0003DMT400001528 | Potato | cytosol | 60.98 | 63.29 |
| KRH27732 | Soybean | mitochondrion | 60.98 | 63.29 |
| GSMUA_Achr11P... | Banana | cytosol | 59.76 | 62.82 |
| VIT_16s0039g02180.t01 | Wine grape | mitochondrion | 60.37 | 62.66 |
| Zm00001d030138_P001 | Maize | cytosol | 43.9 | 62.61 |
| Solyc03g096940.2.1 | Tomato | nucleus | 59.76 | 62.42 |
| CDY49923 | Canola | cytosol | 60.37 | 62.26 |
| CDY23465 | Canola | cytosol | 60.37 | 62.26 |
| Bra021373.1-P | Field mustard | cytosol | 60.37 | 62.26 |
| HORVU1Hr1G051280.1 | Barley | cytosol, mitochondrion, plastid | 76.22 | 61.88 |
| CDY43151 | Canola | cytosol | 59.15 | 61.01 |
| CDY28737 | Canola | cytosol | 59.15 | 61.01 |
| Bra032017.1-P | Field mustard | cytosol | 59.15 | 61.01 |
| AT3G03100.1 | Thale cress | cytosol, mitochondrion, nucleus | 58.54 | 60.38 |
| Zm00001d014428_P002 | Maize | mitochondrion | 56.71 | 46.73 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G200800.1 | EnsemblPlantsGene:TraesCS1D01G200800 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005747 | GO:GO:0008137 |
| GO:GO:0008150 | GO:GO:0009055 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0016020 | GO:GO:0050897 |
| InterPro:NDUFA12 | PANTHER:PTHR12910 | PANTHER:PTHR12910:SF2 | PFAM:PF05071 | MapMan:2.4.1.4.1.6 | : |
Description
No Description!
Coordinates
chr1D:-:283575027..283576295
Molecular Weight (calculated)
19020.3 Da
IEP (calculated)
8.596
GRAVY (calculated)
-0.824
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLFTENALG TETYCKSSLP SLQFCRKGCV VACLSVQTSL LFRQTKIHNI GATLVGVDTF GNKYYEKLHD TQYGRHRWVE YADKGRYNAS QVPAEWHGWL
101: HHITDSTGDK LLEEKTKKFI REHRQNYTGQ GDDLIYHSKG HALNPGQRDW TRYQPWEPKK EEAS
101: HHITDSTGDK LLEEKTKKFI REHRQNYTGQ GDDLIYHSKG HALNPGQRDW TRYQPWEPKK EEAS
001: MALTVAKSAL EAIREKGLGG FMRMIREEGF MRCLPDGNLL QTKIHNIGAT LVGVDKFGNK YYQKLGDTQY GRHRWVEYAS KDRYNASQVP AEWHGWLHFI
101: TDHTGDELLS LKPKRYGLEH KENFSGEGDA YIYHSKGHTL NPGQKNWTRY QSWVPTKTQ
101: TDHTGDELLS LKPKRYGLEH KENFSGEGDA YIYHSKGHTL NPGQKNWTRY QSWVPTKTQ
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Source:UniProtKB/TrEMBL;Acc:A0A178V630]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.