Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G12010.1 | Thale cress | cytosol | 82.65 | 64.54 |
| VIT_04s0008g01380.t01 | Wine grape | nucleus | 69.64 | 56.41 |
| Bra040441.1-P | Field mustard | cytosol | 23.98 | 24.42 |
| Bra007153.1-P | Field mustard | nucleus | 24.23 | 23.46 |
| Bra013151.1-P | Field mustard | plastid | 8.16 | 13.56 |
Protein Annotations
| EnsemblPlants:Bra023359.1 | EnsemblPlants:Bra023359.1-P | EnsemblPlantsGene:Bra023359 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0016020 | InterPro:HARBI1_dom | PANTHER:PTHR22930 | PANTHER:PTHR22930:SF113 | PFAM:PF13359 | SEG:seg |
| UniParc:UPI00025433AE | UniProt:M4E3K6 | MapMan:35.1 | : | : | : |
Description
AT5G12010 (E=1e-187) | unknown protein
Coordinates
chrA02:-:2997101..2998422
Molecular Weight (calculated)
44247.1 Da
IEP (calculated)
8.322
GRAVY (calculated)
-0.391
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQKRARAIS EEENGDTTTN RKKPRASRDV TESEPVQQRR LWVKDRSRAW WEERSRFDYP EDDFKNAFRM SKTTFNLICD ELNSAVAKED TALRNAIPVR
101: QRVAVCVWRL ATGEPLRLVS KKFGLGISTC HKLVLEVCKA IKDVLMPKYL KWPDDEEGLR SVGETFEAVS GIPNIVGSMY TTHVPIIAPK ISVSAYFNKR
201: HTERNQKTSY SITIQAVVNP RGVFTDLCIG WPGSMSDDQV LEKSLLYQRA NSGGLLKGLW VAGGPGHPLL DWVLVPYAQQ GLTWTQHAFN EKMGEVQRVG
301: KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE IREEKMEAEL IVDVVDDEVL PENGLRSVSA MKARDDISHN LLHHGLAGTS FL
101: QRVAVCVWRL ATGEPLRLVS KKFGLGISTC HKLVLEVCKA IKDVLMPKYL KWPDDEEGLR SVGETFEAVS GIPNIVGSMY TTHVPIIAPK ISVSAYFNKR
201: HTERNQKTSY SITIQAVVNP RGVFTDLCIG WPGSMSDDQV LEKSLLYQRA NSGGLLKGLW VAGGPGHPLL DWVLVPYAQQ GLTWTQHAFN EKMGEVQRVG
301: KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE IREEKMEAEL IVDVVDDEVL PENGLRSVSA MKARDDISHN LLHHGLAGTS FL
001: MKAAVFRNED GDEEEEEEEE EEVCNVFDGG EVESKRNNET KNLKGFFTSL LLMEEHEKQD QEARNAASRR EMSDFQSNYR KRARTMSDYY SDLNDYYADA
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL
101: EESGDINLKK SRVSRAVASV AVAAASEIEA ESSEITGSGS VRGTGSGQQR RLWVKDRSRA WWEECSRLDY PEEDFKKAFR MSKSTFELIC DELNSAVAKE
201: DTALRNAIPV RQRVAVCIWR LATGEPLRLV SKKFGLGIST CHKLVLEVCK AIKDVLMPKY LQWPDDESLR NIRERFESVS GIPNVVGSMY TTHIPIIAPK
301: ISVASYFNKR HTERNQKTSY SITIQAVVNP KGVFTDLCIG WPGSMPDDKV LEKSLLYQRA NNGGLLKGMW VAGGPGHPLL DWVLVPYTQQ NLTWTQHAFN
401: EKMSEVQGVA KEAFGRLKGR WACLQKRTEV KLQDLPTVLG ACCVLHNICE MREEKMEPEL MVEVIDDEVL PENVLRSVNA MKARDTISHN LLHHGLAGTS
501: FL
Arabidopsis Description
AT5g12010/F14F18_180 [Source:UniProtKB/TrEMBL;Acc:Q9LYH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.