Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93109 | Canola | plastid | 84.32 | 83.61 |
| AT1G72275.1 | Thale cress | cytosol | 48.31 | 26.89 |
| Zm00001d026435_P001 | Maize | plastid | 29.66 | 15.87 |
| TraesCS2A01G518800.1 | Wheat | plastid | 29.24 | 15.61 |
| TraesCS2D01G520200.1 | Wheat | mitochondrion | 28.81 | 15.49 |
| TraesCS2B01G547100.1 | Wheat | mitochondrion | 27.97 | 15.03 |
| PGSC0003DMT400078858 | Potato | nucleus | 27.97 | 14.67 |
| Solyc07g007360.1.1 | Tomato | cytosol, mitochondrion, nucleus | 25.85 | 13.68 |
| Os04t0644200-00 | Rice | mitochondrion | 28.81 | 12.43 |
| Bra040441.1-P | Field mustard | cytosol | 17.37 | 10.65 |
| Bra007153.1-P | Field mustard | nucleus | 14.41 | 8.4 |
| Bra023359.1-P | Field mustard | cytosol | 13.56 | 8.16 |
| VIT_11s0118g00530.t01 | Wine grape | cytosol | 1.69 | 2.07 |
Protein Annotations
Description
AT1G72270 (E=2e-051) | unknown protein
Coordinates
chrA03:+:20174397..20175676
Molecular Weight (calculated)
26119.0 Da
IEP (calculated)
10.339
GRAVY (calculated)
-0.401
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAAAGNSPA TMKSPASGTP AFVNSKKRKS HRNPTNKSEK LLPNDPLLRR LSSAAAATRS FLQTNDLFLP PHQSLRIESL LSSLPIAPSH STSTTWFHRF
101: VNSASENDDP RWHHCFRMSK PTFSKLLSIL SSSSDLPPLP SSSLAATLFR LAHNASYSSL AQRFGFDSVS DASRAFFTVC KLVHEKLGRL DDPKPDYSPR
201: LLPNCCGALG FARRRICWVE KDQRCYCGEP EPRGFV
101: VNSASENDDP RWHHCFRMSK PTFSKLLSIL SSSSDLPPLP SSSLAATLFR LAHNASYSSL AQRFGFDSVS DASRAFFTVC KLVHEKLGRL DDPKPDYSPR
201: LLPNCCGALG FARRRICWVE KDQRCYCGEP EPRGFV
001: MVAGKRKSDR NPTNVSDKLG LKDPLLRRLS SAAAVTNSFL QANDLFLSPS QTLRLESLIS SLPISPSPSS SSSAITTTTW FNRFLTSATE DEDDPRWCLY
101: FRMSKSTFFS LYSILSHSSL PSFAATIFRL AHGASYECLV HRFGFDSTSQ ASRSFFTVCK LINEKLSQQL DDPKPDFSPN LLPNCYGVVG FGRFEVKGKL
201: LGAKGSILVQ ALVDSNGRFV DISAGWPSTM KPEAIFRQTK LFSIAEEVLS GAPTKLGNGV LVPRYILGDS CLPLLPWLVT PYDLTSDEES FREEFNNVVH
301: TGLHSVEIAF AKVRARWRIL DKKWKPETIE FMPFVITTGC LLHNFLVNSG DDDDSVEECV NGCEAGDNGE MRKDDDKEEE TRSFEGEAYR ESKRIRDAIA
401: ENLSRVSSLR
101: FRMSKSTFFS LYSILSHSSL PSFAATIFRL AHGASYECLV HRFGFDSTSQ ASRSFFTVCK LINEKLSQQL DDPKPDFSPN LLPNCYGVVG FGRFEVKGKL
201: LGAKGSILVQ ALVDSNGRFV DISAGWPSTM KPEAIFRQTK LFSIAEEVLS GAPTKLGNGV LVPRYILGDS CLPLLPWLVT PYDLTSDEES FREEFNNVVH
301: TGLHSVEIAF AKVRARWRIL DKKWKPETIE FMPFVITTGC LLHNFLVNSG DDDDSVEECV NGCEAGDNGE MRKDDDKEEE TRSFEGEAYR ESKRIRDAIA
401: ENLSRVSSLR
Arabidopsis Description
LOW protein: nuclease-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AMV0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.